Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
R3HCC1Q9Y3T6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
R3HCC1Q9Y3T6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
R3HCC1Q9Y3T6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
R3HCC1Q9Y3T6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
R3HCC1Q9Y3T6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
R3HCC1Q9Y3T6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
R3HCC1Q9Y3T6 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.35■■□□□ 1.81
R3HCC1Q9Y3T6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
R3HCC1Q9Y3T6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.35■■□□□ 1.81
R3HCC1Q9Y3T6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 AC093536.1-201ENST00000569153 554 ntBASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 AL024507.2-201ENST00000606070 2574 ntBASIC26.34■■□□□ 1.81
R3HCC1Q9Y3T6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
R3HCC1Q9Y3T6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
R3HCC1Q9Y3T6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
R3HCC1Q9Y3T6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.33■■□□□ 1.81
R3HCC1Q9Y3T6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
R3HCC1Q9Y3T6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.33■■□□□ 1.8
R3HCC1Q9Y3T6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
R3HCC1Q9Y3T6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
R3HCC1Q9Y3T6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
R3HCC1Q9Y3T6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
R3HCC1Q9Y3T6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
R3HCC1Q9Y3T6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
R3HCC1Q9Y3T6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
R3HCC1Q9Y3T6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
R3HCC1Q9Y3T6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.32■■□□□ 1.8
R3HCC1Q9Y3T6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 AC133552.2-201ENST00000619106 1032 ntBASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
R3HCC1Q9Y3T6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 NTF6A-201ENST00000591175 560 ntBASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.3■■□□□ 1.8
R3HCC1Q9Y3T6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 C9orf163-202ENST00000624034 2573 ntBASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3HCC1Q9Y3T6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3HCC1Q9Y3T6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
R3HCC1Q9Y3T6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 AC026202.3-201ENST00000600805 1127 ntBASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 U85056.1-201ENST00000616429 682 ntBASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3HCC1Q9Y3T6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 AC096887.2-201ENST00000623443 1957 ntBASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
R3HCC1Q9Y3T6 AC009831.1-201ENST00000580420 1582 ntBASIC26.24■■□□□ 1.79
R3HCC1Q9Y3T6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
R3HCC1Q9Y3T6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms