Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PTPN22Q9Y2R2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.97■■□□□ 1.91
PTPN22Q9Y2R2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PTPN22Q9Y2R2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PTPN22Q9Y2R2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
PTPN22Q9Y2R2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.96■■□□□ 1.91
PTPN22Q9Y2R2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PTPN22Q9Y2R2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PTPN22Q9Y2R2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.95■■□□□ 1.9
PTPN22Q9Y2R2 SNX5-217ENST00000606557 1087 ntBASIC26.95■■□□□ 1.9
PTPN22Q9Y2R2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
PTPN22Q9Y2R2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PTPN22Q9Y2R2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
PTPN22Q9Y2R2 AC004448.1-201ENST00000458332 883 ntBASIC26.93■■□□□ 1.9
PTPN22Q9Y2R2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.93■■□□□ 1.9
PTPN22Q9Y2R2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.93■■□□□ 1.9
PTPN22Q9Y2R2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.92■■□□□ 1.9
PTPN22Q9Y2R2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTPN22Q9Y2R2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.92■■□□□ 1.9
PTPN22Q9Y2R2 BX255925.1-201ENST00000566954 1854 ntBASIC26.91■■□□□ 1.9
PTPN22Q9Y2R2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
PTPN22Q9Y2R2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTPN22Q9Y2R2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.91■■□□□ 1.9
PTPN22Q9Y2R2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTPN22Q9Y2R2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 DUX4L19-201ENST00000557448 1267 ntBASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 CA15P2-201ENST00000611168 834 ntBASIC26.9■■□□□ 1.9
PTPN22Q9Y2R2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PTPN22Q9Y2R2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.89■■□□□ 1.9
PTPN22Q9Y2R2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTPN22Q9Y2R2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
PTPN22Q9Y2R2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PTPN22Q9Y2R2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.89
PTPN22Q9Y2R2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTPN22Q9Y2R2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
PTPN22Q9Y2R2 RASA4CP-201ENST00000424092 1398 ntBASIC26.86■■□□□ 1.89
PTPN22Q9Y2R2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.86■■□□□ 1.89
PTPN22Q9Y2R2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PTPN22Q9Y2R2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.85■■□□□ 1.89
PTPN22Q9Y2R2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PTPN22Q9Y2R2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.84■■□□□ 1.89
PTPN22Q9Y2R2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PTPN22Q9Y2R2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PTPN22Q9Y2R2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 IRS3P-201ENST00000223076 1006 ntBASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 MIR4767-201ENST00000582827 78 ntBASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 IKBKGP1-201ENST00000612193 1073 ntBASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
PTPN22Q9Y2R2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
PTPN22Q9Y2R2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTPN22Q9Y2R2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTPN22Q9Y2R2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.82■■□□□ 1.88
PTPN22Q9Y2R2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTPN22Q9Y2R2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTPN22Q9Y2R2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTPN22Q9Y2R2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTPN22Q9Y2R2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
PTPN22Q9Y2R2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 SYT6-210ENST00000641643 1587 ntBASIC26.79■■□□□ 1.88
PTPN22Q9Y2R2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms