Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMP3Q9UQV4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.19■□□□□ 0.82
LAMP3Q9UQV4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LAMP3Q9UQV4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.19■□□□□ 0.82
LAMP3Q9UQV4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 MTDHP2-201ENST00000601468 714 ntBASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMP3Q9UQV4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMP3Q9UQV4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LAMP3Q9UQV4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 DUSP8P4-201ENST00000399538 1761 ntBASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LAMP3Q9UQV4 AC092803.2-201ENST00000564287 1899 ntBASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.14■□□□□ 0.81
LAMP3Q9UQV4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 AC131281.2-201ENST00000520478 145 ntBASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LAMP3Q9UQV4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 FOXO3B-201ENST00000395675 1928 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 MIR6724-1-201ENST00000616420 92 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 MIR6724-2-201ENST00000616483 92 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 MIR6724-4-201ENST00000617390 92 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 MIR6724-3-201ENST00000622482 92 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 AL117332.1-201ENST00000622628 974 ntBASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.12■□□□□ 0.81
LAMP3Q9UQV4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 AL136116.3-201ENST00000402907 1138 ntBASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LAMP3Q9UQV4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 AL356740.2-201ENST00000601559 647 ntBASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LAMP3Q9UQV4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms