Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
COPS3Q9UNS2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS3Q9UNS2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COPS3Q9UNS2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COPS3Q9UNS2 AC007029.1-201ENST00000604183 313 ntBASIC20.72■□□□□ 0.91
COPS3Q9UNS2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS3Q9UNS2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS3Q9UNS2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS3Q9UNS2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
COPS3Q9UNS2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.7■□□□□ 0.9
COPS3Q9UNS2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 RAP2CP1-202ENST00000605179 643 ntBASIC20.69■□□□□ 0.9
COPS3Q9UNS2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPS3Q9UNS2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS3Q9UNS2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COPS3Q9UNS2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPS3Q9UNS2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS3Q9UNS2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPS3Q9UNS2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 FOXO3B-201ENST00000395675 1928 ntBASIC20.67■□□□□ 0.9
COPS3Q9UNS2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 AC068473.5-201ENST00000616428 2072 ntBASIC20.67■□□□□ 0.9
COPS3Q9UNS2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPS3Q9UNS2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPS3Q9UNS2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
COPS3Q9UNS2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPS3Q9UNS2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.64■□□□□ 0.9
COPS3Q9UNS2 AC026202.3-201ENST00000600805 1127 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms