Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF7Q9UBF6 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF7Q9UBF6 AP003733.4-201ENST00000623785 1697 ntBASIC19.7■□□□□ 0.74
RNF7Q9UBF6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF7Q9UBF6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF7Q9UBF6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF7Q9UBF6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF7Q9UBF6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF7Q9UBF6 AC138932.3-201ENST00000567634 1902 ntBASIC19.66■□□□□ 0.74
RNF7Q9UBF6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF7Q9UBF6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF7Q9UBF6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF7Q9UBF6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF7Q9UBF6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF7Q9UBF6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF7Q9UBF6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF7Q9UBF6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF7Q9UBF6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF7Q9UBF6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF7Q9UBF6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF7Q9UBF6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF7Q9UBF6 MIR4281-201ENST00000580852 62 ntBASIC19.64■□□□□ 0.73
RNF7Q9UBF6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF7Q9UBF6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF7Q9UBF6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF7Q9UBF6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF7Q9UBF6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF7Q9UBF6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF7Q9UBF6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 AL451085.2-201ENST00000605085 799 ntBASIC19.6■□□□□ 0.73
RNF7Q9UBF6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF7Q9UBF6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF7Q9UBF6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF7Q9UBF6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF7Q9UBF6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RNF7Q9UBF6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RNF7Q9UBF6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RNF7Q9UBF6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF7Q9UBF6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms