Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.73■□□□□ 0.75
COMMD9Q9P000 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
COMMD9Q9P000 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COMMD9Q9P000 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COMMD9Q9P000 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD9Q9P000 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD9Q9P000 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD9Q9P000 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
COMMD9Q9P000 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD9Q9P000 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD9Q9P000 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD9Q9P000 MIR219A2-201ENST00000608502 1504 ntBASIC19.71■□□□□ 0.75
COMMD9Q9P000 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COMMD9Q9P000 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
COMMD9Q9P000 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COMMD9Q9P000 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD9Q9P000 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD9Q9P000 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD9Q9P000 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD9Q9P000 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.7■□□□□ 0.74
COMMD9Q9P000 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.7■□□□□ 0.74
COMMD9Q9P000 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COMMD9Q9P000 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.7■□□□□ 0.74
COMMD9Q9P000 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COMMD9Q9P000 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD9Q9P000 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COMMD9Q9P000 DUX4L11-201ENST00000611504 1267 ntBASIC19.69■□□□□ 0.74
COMMD9Q9P000 DUX4L12-201ENST00000614593 1267 ntBASIC19.69■□□□□ 0.74
COMMD9Q9P000 DUX4L14-201ENST00000621227 1267 ntBASIC19.69■□□□□ 0.74
COMMD9Q9P000 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD9Q9P000 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 RPS2P35-201ENST00000443417 897 ntBASIC19.68■□□□□ 0.74
COMMD9Q9P000 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COMMD9Q9P000 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD9Q9P000 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD9Q9P000 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COMMD9Q9P000 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD9Q9P000 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.67■□□□□ 0.74
COMMD9Q9P000 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COMMD9Q9P000 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD9Q9P000 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD9Q9P000 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD9Q9P000 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
COMMD9Q9P000 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COMMD9Q9P000 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD9Q9P000 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD9Q9P000 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD9Q9P000 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.65■□□□□ 0.74
COMMD9Q9P000 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD9Q9P000 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD9Q9P000 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD9Q9P000 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD9Q9P000 AL117328.2-201ENST00000624617 1940 ntBASIC19.64■□□□□ 0.74
COMMD9Q9P000 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms