Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 LONRF2P2-201ENST00000439212 571 ntBASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC40Q9H9A6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 HLA-L-211ENST00000482052 1765 ntBASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC40Q9H9A6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.66■■□□□ 1.38
LRRC40Q9H9A6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.65■■□□□ 1.38
LRRC40Q9H9A6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC40Q9H9A6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRC40Q9H9A6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 DUX4L18-201ENST00000553347 1267 ntBASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC40Q9H9A6 AC090877.2-201ENST00000558441 1738 ntBASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC40Q9H9A6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 AC139795.1-202ENST00000500444 432 ntBASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
LRRC40Q9H9A6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC40Q9H9A6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC40Q9H9A6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
LRRC40Q9H9A6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC40Q9H9A6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 AC019171.1-201ENST00000601251 1056 ntBASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
LRRC40Q9H9A6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRRC40Q9H9A6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.58■■□□□ 1.36
LRRC40Q9H9A6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 AC004987.1-201ENST00000428627 508 ntBASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 ATP5G2P3-201ENST00000429083 425 ntBASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC40Q9H9A6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC40Q9H9A6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms