Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC097639.1-201ENST00000565519 1891 ntBASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 AC142381.2-201ENST00000566120 298 ntBASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 AL031432.3-201ENST00000607698 485 ntBASIC30.73■■■□□ 2.51
PCDH11YQ9BZA8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 UNC93B3-201ENST00000308076 687 ntBASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.72■■■□□ 2.51
PCDH11YQ9BZA8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDH11YQ9BZA8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.51
PCDH11YQ9BZA8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.7■■■□□ 2.5
PCDH11YQ9BZA8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PCDH11YQ9BZA8 AL136162.1-201ENST00000607711 1078 ntBASIC30.7■■■□□ 2.5
PCDH11YQ9BZA8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PCDH11YQ9BZA8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDH11YQ9BZA8 SRD5A1P1-201ENST00000442297 786 ntBASIC30.69■■■□□ 2.5
PCDH11YQ9BZA8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.69■■■□□ 2.5
PCDH11YQ9BZA8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
PCDH11YQ9BZA8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 RARRES2P6-201ENST00000567333 442 ntBASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 AC135279.3-201ENST00000610945 1311 ntBASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.68■■■□□ 2.5
PCDH11YQ9BZA8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.67■■■□□ 2.5
PCDH11YQ9BZA8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PCDH11YQ9BZA8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.67■■■□□ 2.5
PCDH11YQ9BZA8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.67■■■□□ 2.5
PCDH11YQ9BZA8 SUDS3P1-201ENST00000505831 966 ntBASIC30.67■■■□□ 2.5
PCDH11YQ9BZA8 ERN1-208ENST00000606895 2068 ntBASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDH11YQ9BZA8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDH11YQ9BZA8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.64■■■□□ 2.5
PCDH11YQ9BZA8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.64■■■□□ 2.5
PCDH11YQ9BZA8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDH11YQ9BZA8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.64■■■□□ 2.5
PCDH11YQ9BZA8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PCDH11YQ9BZA8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.64■■■□□ 2.49
PCDH11YQ9BZA8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDH11YQ9BZA8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 AC004448.1-201ENST00000458332 883 ntBASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
PCDH11YQ9BZA8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 EDA-201ENST00000338901 1233 ntBASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 AC024257.2-201ENST00000549699 147 ntBASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.61■■■□□ 2.49
PCDH11YQ9BZA8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCDH11YQ9BZA8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCDH11YQ9BZA8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCDH11YQ9BZA8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCDH11YQ9BZA8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.6■■■□□ 2.49
PCDH11YQ9BZA8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.59■■■□□ 2.49
PCDH11YQ9BZA8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDH11YQ9BZA8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.59■■■□□ 2.49
PCDH11YQ9BZA8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDH11YQ9BZA8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms