Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VRK1Q99986 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VRK1Q99986 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
VRK1Q99986 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.39■□□□□ 0.86
VRK1Q99986 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.39■□□□□ 0.85
VRK1Q99986 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK1Q99986 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VRK1Q99986 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VRK1Q99986 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VRK1Q99986 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK1Q99986 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.38■□□□□ 0.85
VRK1Q99986 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK1Q99986 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
VRK1Q99986 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VRK1Q99986 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.37■□□□□ 0.85
VRK1Q99986 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
VRK1Q99986 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK1Q99986 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK1Q99986 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.36■□□□□ 0.85
VRK1Q99986 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
VRK1Q99986 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.36■□□□□ 0.85
VRK1Q99986 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.36■□□□□ 0.85
VRK1Q99986 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK1Q99986 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VRK1Q99986 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.36■□□□□ 0.85
VRK1Q99986 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VRK1Q99986 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK1Q99986 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.35■□□□□ 0.85
VRK1Q99986 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
VRK1Q99986 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.35■□□□□ 0.85
VRK1Q99986 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK1Q99986 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.35■□□□□ 0.85
VRK1Q99986 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VRK1Q99986 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.35■□□□□ 0.85
VRK1Q99986 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK1Q99986 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK1Q99986 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK1Q99986 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK1Q99986 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK1Q99986 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.34■□□□□ 0.85
VRK1Q99986 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.34■□□□□ 0.85
VRK1Q99986 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK1Q99986 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK1Q99986 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.34■□□□□ 0.85
VRK1Q99986 AC012676.1-201ENST00000574705 1949 ntBASIC20.33■□□□□ 0.85
VRK1Q99986 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK1Q99986 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.33■□□□□ 0.85
VRK1Q99986 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.33■□□□□ 0.85
VRK1Q99986 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VRK1Q99986 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VRK1Q99986 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.33■□□□□ 0.84
VRK1Q99986 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VRK1Q99986 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
VRK1Q99986 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK1Q99986 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.32■□□□□ 0.84
VRK1Q99986 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VRK1Q99986 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VRK1Q99986 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
VRK1Q99986 AC022616.5-201ENST00000518796 181 ntBASIC20.32■□□□□ 0.84
VRK1Q99986 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VRK1Q99986 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK1Q99986 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VRK1Q99986 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK1Q99986 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VRK1Q99986 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VRK1Q99986 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.31■□□□□ 0.84
VRK1Q99986 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.31■□□□□ 0.84
VRK1Q99986 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VRK1Q99986 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
VRK1Q99986 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK1Q99986 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
VRK1Q99986 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
VRK1Q99986 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VRK1Q99986 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms