Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 LINC01124-201ENST00000409786 2117 ntBASIC18.67■□□□□ 0.58
RNF5Q99942 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF5Q99942 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF5Q99942 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF5Q99942 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 HLA-L-211ENST00000482052 1765 ntBASIC18.66■□□□□ 0.58
RNF5Q99942 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF5Q99942 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF5Q99942 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF5Q99942 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF5Q99942 AL161729.1-201ENST00000604104 1402 ntBASIC18.66■□□□□ 0.58
RNF5Q99942 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RNF5Q99942 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RNF5Q99942 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF5Q99942 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF5Q99942 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF5Q99942 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF5Q99942 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF5Q99942 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF5Q99942 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF5Q99942 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF5Q99942 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF5Q99942 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF5Q99942 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF5Q99942 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF5Q99942 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF5Q99942 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF5Q99942 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF5Q99942 AC093323.1-202ENST00000635031 2045 ntBASIC18.64■□□□□ 0.57
RNF5Q99942 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF5Q99942 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
RNF5Q99942 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF5Q99942 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF5Q99942 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 KRT18P24-201ENST00000344739 1156 ntBASIC18.62■□□□□ 0.57
RNF5Q99942 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF5Q99942 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF5Q99942 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RNF5Q99942 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF5Q99942 AC135731.1-201ENST00000569415 2548 ntBASIC18.61■□□□□ 0.57
RNF5Q99942 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF5Q99942 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF5Q99942 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF5Q99942 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF5Q99942 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF5Q99942 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF5Q99942 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF5Q99942 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
RNF5Q99942 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF5Q99942 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF5Q99942 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF5Q99942 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF5Q99942 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF5Q99942 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF5Q99942 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF5Q99942 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF5Q99942 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF5Q99942 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF5Q99942 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
RNF5Q99942 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF5Q99942 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.59■□□□□ 0.57
RNF5Q99942 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF5Q99942 AL033527.3-201ENST00000566366 1196 ntBASIC18.59■□□□□ 0.57
RNF5Q99942 MIR4508-201ENST00000584178 70 ntBASIC18.59■□□□□ 0.57
RNF5Q99942 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF5Q99942 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF5Q99942 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RNF5Q99942 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms