Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SLC6A7Q99884 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC6A7Q99884 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A7Q99884 AP003733.4-201ENST00000623785 1697 ntBASIC20.18■□□□□ 0.82
SLC6A7Q99884 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A7Q99884 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A7Q99884 AC097639.1-201ENST00000565519 1891 ntBASIC20.17■□□□□ 0.82
SLC6A7Q99884 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLC6A7Q99884 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A7Q99884 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC6A7Q99884 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC6A7Q99884 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC6A7Q99884 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC6A7Q99884 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.15■□□□□ 0.82
SLC6A7Q99884 AC026202.3-201ENST00000600805 1127 ntBASIC20.15■□□□□ 0.82
SLC6A7Q99884 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC6A7Q99884 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC6A7Q99884 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A7Q99884 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SLC6A7Q99884 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC6A7Q99884 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC6A7Q99884 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
SLC6A7Q99884 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A7Q99884 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC6A7Q99884 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A7Q99884 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SLC6A7Q99884 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLC6A7Q99884 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC6A7Q99884 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A7Q99884 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A7Q99884 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A7Q99884 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A7Q99884 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLC6A7Q99884 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A7Q99884 AC025884.2-201ENST00000553429 711 ntBASIC20.12■□□□□ 0.81
SLC6A7Q99884 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A7Q99884 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC6A7Q99884 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A7Q99884 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A7Q99884 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 RP9P-202ENST00000450133 1212 ntBASIC20.11■□□□□ 0.81
SLC6A7Q99884 AC093536.1-201ENST00000569153 554 ntBASIC20.11■□□□□ 0.81
SLC6A7Q99884 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A7Q99884 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC6A7Q99884 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A7Q99884 LINC00543-201ENST00000567234 1845 ntBASIC20.11■□□□□ 0.81
SLC6A7Q99884 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A7Q99884 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A7Q99884 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC6A7Q99884 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A7Q99884 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC6A7Q99884 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC6A7Q99884 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A7Q99884 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A7Q99884 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SLC6A7Q99884 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC6A7Q99884 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A7Q99884 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A7Q99884 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A7Q99884 DUX4L9-201ENST00000449051 1259 ntBASIC20.09■□□□□ 0.81
SLC6A7Q99884 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A7Q99884 BHLHE23-202ENST00000612929 1109 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms