Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC38A3Q99624 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.66■■□□□ 1.22
SLC38A3Q99624 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC38A3Q99624 AC135731.1-201ENST00000569415 2548 ntBASIC22.65■■□□□ 1.22
SLC38A3Q99624 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC38A3Q99624 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC38A3Q99624 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC38A3Q99624 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC38A3Q99624 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.64■■□□□ 1.21
SLC38A3Q99624 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
SLC38A3Q99624 DUSP8P4-201ENST00000399538 1761 ntBASIC22.63■■□□□ 1.21
SLC38A3Q99624 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC38A3Q99624 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC38A3Q99624 MIR6724-1-201ENST00000616420 92 ntBASIC22.63■■□□□ 1.21
SLC38A3Q99624 MIR6724-2-201ENST00000616483 92 ntBASIC22.63■■□□□ 1.21
SLC38A3Q99624 MIR6724-4-201ENST00000617390 92 ntBASIC22.63■■□□□ 1.21
SLC38A3Q99624 MIR6724-3-201ENST00000622482 92 ntBASIC22.63■■□□□ 1.21
SLC38A3Q99624 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC38A3Q99624 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC38A3Q99624 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
SLC38A3Q99624 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC38A3Q99624 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC38A3Q99624 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC38A3Q99624 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC38A3Q99624 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC38A3Q99624 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC38A3Q99624 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.61■■□□□ 1.21
SLC38A3Q99624 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC38A3Q99624 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.61■■□□□ 1.21
SLC38A3Q99624 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC38A3Q99624 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC38A3Q99624 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SLC38A3Q99624 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC38A3Q99624 AC091060.1-201ENST00000623524 1766 ntBASIC22.6■■□□□ 1.21
SLC38A3Q99624 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC38A3Q99624 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC38A3Q99624 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC38A3Q99624 AC145676.1-201ENST00000514988 2004 ntBASIC22.58■■□□□ 1.21
SLC38A3Q99624 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC38A3Q99624 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC38A3Q99624 AL117332.1-201ENST00000622628 974 ntBASIC22.58■■□□□ 1.21
SLC38A3Q99624 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC38A3Q99624 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC38A3Q99624 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC38A3Q99624 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 AL356740.2-201ENST00000601559 647 ntBASIC22.57■■□□□ 1.2
SLC38A3Q99624 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC38A3Q99624 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC38A3Q99624 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC38A3Q99624 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC38A3Q99624 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC38A3Q99624 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC38A3Q99624 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC38A3Q99624 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC38A3Q99624 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC38A3Q99624 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.56■■□□□ 1.2
SLC38A3Q99624 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SLC38A3Q99624 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC38A3Q99624 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC38A3Q99624 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC38A3Q99624 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC38A3Q99624 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC38A3Q99624 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC38A3Q99624 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC38A3Q99624 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC38A3Q99624 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms