Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
COL21A1Q96P44 AC087393.1-201ENST00000582896 145 ntBASIC21.96■■□□□ 1.11
COL21A1Q96P44 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
COL21A1Q96P44 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 AC139795.1-202ENST00000500444 432 ntBASIC21.95■■□□□ 1.1
COL21A1Q96P44 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.95■■□□□ 1.1
COL21A1Q96P44 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL21A1Q96P44 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.94■■□□□ 1.1
COL21A1Q96P44 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.94■■□□□ 1.1
COL21A1Q96P44 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL21A1Q96P44 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL21A1Q96P44 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL21A1Q96P44 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL21A1Q96P44 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL21A1Q96P44 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.93■■□□□ 1.1
COL21A1Q96P44 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL21A1Q96P44 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL21A1Q96P44 BHLHE23-202ENST00000612929 1109 ntBASIC21.93■■□□□ 1.1
COL21A1Q96P44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.93■■□□□ 1.1
COL21A1Q96P44 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
COL21A1Q96P44 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL21A1Q96P44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.92■■□□□ 1.1
COL21A1Q96P44 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL21A1Q96P44 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.92■■□□□ 1.1
COL21A1Q96P44 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.92■■□□□ 1.1
COL21A1Q96P44 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.91■■□□□ 1.1
COL21A1Q96P44 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.91■■□□□ 1.1
COL21A1Q96P44 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.91■■□□□ 1.1
COL21A1Q96P44 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.91■■□□□ 1.1
COL21A1Q96P44 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL21A1Q96P44 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL21A1Q96P44 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.9■■□□□ 1.1
COL21A1Q96P44 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
COL21A1Q96P44 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL21A1Q96P44 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
COL21A1Q96P44 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL21A1Q96P44 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL21A1Q96P44 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL21A1Q96P44 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COL21A1Q96P44 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.89■■□□□ 1.09
COL21A1Q96P44 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.89■■□□□ 1.09
COL21A1Q96P44 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.89■■□□□ 1.09
COL21A1Q96P44 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL21A1Q96P44 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
COL21A1Q96P44 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.88■■□□□ 1.09
COL21A1Q96P44 AC074183.2-201ENST00000623112 922 ntBASIC21.88■■□□□ 1.09
COL21A1Q96P44 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
COL21A1Q96P44 AC133561.1-201ENST00000568600 2415 ntBASIC21.88■■□□□ 1.09
COL21A1Q96P44 AC012676.1-201ENST00000574705 1949 ntBASIC21.88■■□□□ 1.09
COL21A1Q96P44 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL21A1Q96P44 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL21A1Q96P44 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL21A1Q96P44 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.87■■□□□ 1.09
COL21A1Q96P44 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COL21A1Q96P44 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
COL21A1Q96P44 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL21A1Q96P44 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL21A1Q96P44 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL21A1Q96P44 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL21A1Q96P44 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL21A1Q96P44 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.86■■□□□ 1.09
COL21A1Q96P44 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms