Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ATP6V0A1Q93050 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.27■■□□□ 1.8
ATP6V0A1Q93050 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP6V0A1Q93050 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ATP6V0A1Q93050 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ATP6V0A1Q93050 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.26■■□□□ 1.79
ATP6V0A1Q93050 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.26■■□□□ 1.79
ATP6V0A1Q93050 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.26■■□□□ 1.79
ATP6V0A1Q93050 AC090877.2-201ENST00000558441 1738 ntBASIC26.25■■□□□ 1.79
ATP6V0A1Q93050 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP6V0A1Q93050 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP6V0A1Q93050 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP6V0A1Q93050 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP6V0A1Q93050 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP6V0A1Q93050 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP6V0A1Q93050 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ATP6V0A1Q93050 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP6V0A1Q93050 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.22■■□□□ 1.79
ATP6V0A1Q93050 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
ATP6V0A1Q93050 SLC6A10P-202ENST00000431994 2058 ntBASIC26.22■■□□□ 1.79
ATP6V0A1Q93050 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP6V0A1Q93050 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
ATP6V0A1Q93050 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.21■■□□□ 1.79
ATP6V0A1Q93050 AC010997.5-201ENST00000609182 354 ntBASIC26.21■■□□□ 1.79
ATP6V0A1Q93050 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP6V0A1Q93050 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP6V0A1Q93050 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.2■■□□□ 1.78
ATP6V0A1Q93050 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.2■■□□□ 1.78
ATP6V0A1Q93050 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.2■■□□□ 1.78
ATP6V0A1Q93050 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ATP6V0A1Q93050 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 MTDHP2-201ENST00000601468 714 ntBASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6V0A1Q93050 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP6V0A1Q93050 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP6V0A1Q93050 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.16■■□□□ 1.78
ATP6V0A1Q93050 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.16■■□□□ 1.78
ATP6V0A1Q93050 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP6V0A1Q93050 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 AC131281.2-201ENST00000520478 145 ntBASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
ATP6V0A1Q93050 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 MIR6724-1-201ENST00000616420 92 ntBASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 MIR6724-2-201ENST00000616483 92 ntBASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 MIR6724-4-201ENST00000617390 92 ntBASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 MIR6724-3-201ENST00000622482 92 ntBASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 AL117332.1-201ENST00000622628 974 ntBASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP6V0A1Q93050 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ATP6V0A1Q93050 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.13■■□□□ 1.77
ATP6V0A1Q93050 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 AF131216.4-201ENST00000638924 1588 ntBASIC26.12■■□□□ 1.77
ATP6V0A1Q93050 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP6V0A1Q93050 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms