Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4IP1Q8WWV3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4IP1Q8WWV3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 RARRES2P2-201ENST00000394842 485 ntBASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RTN4IP1Q8WWV3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4IP1Q8WWV3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4IP1Q8WWV3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4IP1Q8WWV3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.51■□□□□ 0.71
RTN4IP1Q8WWV3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 AC026202.3-201ENST00000600805 1127 ntBASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4IP1Q8WWV3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 RAP2CP1-202ENST00000605179 643 ntBASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4IP1Q8WWV3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 AC004812.2-201ENST00000611079 2094 ntBASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.48■□□□□ 0.71
RTN4IP1Q8WWV3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4IP1Q8WWV3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
RTN4IP1Q8WWV3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4IP1Q8WWV3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms