Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.77■■□□□ 1.72
SCFD1Q8WVM8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCFD1Q8WVM8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCFD1Q8WVM8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCFD1Q8WVM8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.77■■□□□ 1.72
SCFD1Q8WVM8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 AC010980.1-201ENST00000587192 1142 ntBASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 HLA-L-211ENST00000482052 1765 ntBASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.71
SCFD1Q8WVM8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 AC090877.2-201ENST00000558441 1738 ntBASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.75■■□□□ 1.71
SCFD1Q8WVM8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 AC074183.2-201ENST00000623112 922 ntBASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SCFD1Q8WVM8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCFD1Q8WVM8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCFD1Q8WVM8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.71■■□□□ 1.71
SCFD1Q8WVM8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 LINC00543-201ENST00000567234 1845 ntBASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.7■■□□□ 1.71
SCFD1Q8WVM8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
SCFD1Q8WVM8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCFD1Q8WVM8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.7■■□□□ 1.7
SCFD1Q8WVM8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCFD1Q8WVM8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCFD1Q8WVM8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SCFD1Q8WVM8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.69■■□□□ 1.7
SCFD1Q8WVM8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.69■■□□□ 1.7
SCFD1Q8WVM8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 AC022616.5-201ENST00000518796 181 ntBASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCFD1Q8WVM8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCFD1Q8WVM8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCFD1Q8WVM8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCFD1Q8WVM8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SCFD1Q8WVM8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCFD1Q8WVM8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.66■■□□□ 1.7
SCFD1Q8WVM8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCFD1Q8WVM8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SCFD1Q8WVM8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCFD1Q8WVM8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCFD1Q8WVM8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCFD1Q8WVM8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms