Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HLA-L-211ENST00000482052 1765 ntBASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 LINC00543-201ENST00000567234 1845 ntBASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDH19Q8TAB3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH19Q8TAB3 AL592295.1-201ENST00000400984 884 ntBASIC24.15■■□□□ 1.46
PCDH19Q8TAB3 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDH19Q8TAB3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH19Q8TAB3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PCDH19Q8TAB3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH19Q8TAB3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH19Q8TAB3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.14■■□□□ 1.46
PCDH19Q8TAB3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.14■■□□□ 1.46
PCDH19Q8TAB3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH19Q8TAB3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH19Q8TAB3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
PCDH19Q8TAB3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH19Q8TAB3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH19Q8TAB3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH19Q8TAB3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH19Q8TAB3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 AC139795.1-202ENST00000500444 432 ntBASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH19Q8TAB3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 AC090877.2-201ENST00000558441 1738 ntBASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 AC019171.1-201ENST00000601251 1056 ntBASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH19Q8TAB3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
PCDH19Q8TAB3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDH19Q8TAB3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH19Q8TAB3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH19Q8TAB3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
PCDH19Q8TAB3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
PCDH19Q8TAB3 RARRES2P1-201ENST00000474487 481 ntBASIC24.08■■□□□ 1.45
PCDH19Q8TAB3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH19Q8TAB3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH19Q8TAB3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH19Q8TAB3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH19Q8TAB3 AC141586.4-201ENST00000624558 1573 ntBASIC24.08■■□□□ 1.44
PCDH19Q8TAB3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 PVT1_1.1-201ENST00000615125 194 ntBASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH19Q8TAB3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH19Q8TAB3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms