Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 AC103834.1-201ENST00000520383 144 ntBASIC23.81■■□□□ 1.4
PAF1Q8N7H5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 AL031848.2-201ENST00000607670 837 ntBASIC23.8■■□□□ 1.4
PAF1Q8N7H5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PAF1Q8N7H5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 THA1P-201ENST00000590384 1145 ntBASIC23.79■■□□□ 1.4
PAF1Q8N7H5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PAF1Q8N7H5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PAF1Q8N7H5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
PAF1Q8N7H5 AC103724.3-201ENST00000564481 992 ntBASIC23.77■■□□□ 1.4
PAF1Q8N7H5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PAF1Q8N7H5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
PAF1Q8N7H5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PAF1Q8N7H5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PAF1Q8N7H5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PAF1Q8N7H5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PAF1Q8N7H5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PAF1Q8N7H5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PAF1Q8N7H5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PAF1Q8N7H5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PAF1Q8N7H5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PAF1Q8N7H5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 AC120024.1-201ENST00000562672 995 ntBASIC23.71■■□□□ 1.39
PAF1Q8N7H5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PAF1Q8N7H5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PAF1Q8N7H5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.7■■□□□ 1.38
PAF1Q8N7H5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PAF1Q8N7H5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms