Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf42Q8N5U0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.33■□□□□ 0.69
C11orf42Q8N5U0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf42Q8N5U0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf42Q8N5U0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf42Q8N5U0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 RARRES2P1-201ENST00000474487 481 ntBASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 KRT8P33-201ENST00000508125 1423 ntBASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf42Q8N5U0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 AC022211.4-201ENST00000625094 2161 ntBASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
C11orf42Q8N5U0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf42Q8N5U0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 AC103724.3-201ENST00000564481 992 ntBASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.29■□□□□ 0.68
C11orf42Q8N5U0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 YBX1P4-201ENST00000392794 808 ntBASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C11orf42Q8N5U0 KRT18P24-201ENST00000344739 1156 ntBASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf42Q8N5U0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.27■□□□□ 0.67
C11orf42Q8N5U0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf42Q8N5U0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 MIR6089-201ENST00000616698 64 ntBASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C11orf42Q8N5U0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 AC120024.1-201ENST00000562672 995 ntBASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
C11orf42Q8N5U0 AC090877.2-201ENST00000558441 1738 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms