Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD2Q8IV50 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD2Q8IV50 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD2Q8IV50 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 DUX4L28-201ENST00000623687 678 ntBASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD2Q8IV50 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYSMD2Q8IV50 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYSMD2Q8IV50 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 AL137060.1-201ENST00000618151 2648 ntBASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 FOXO3B-201ENST00000395675 1928 ntBASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYSMD2Q8IV50 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 GUSBP5-202ENST00000510805 1989 ntBASIC20.43■□□□□ 0.86
LYSMD2Q8IV50 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 DUSP8P3-201ENST00000399571 1760 ntBASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD2Q8IV50 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD2Q8IV50 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD2Q8IV50 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms