Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF135Q8IUD6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.75■■□□□ 1.55
RNF135Q8IUD6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
RNF135Q8IUD6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RNF135Q8IUD6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 AL136162.1-201ENST00000607711 1078 ntBASIC24.73■■□□□ 1.55
RNF135Q8IUD6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RNF135Q8IUD6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF135Q8IUD6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.72■■□□□ 1.55
RNF135Q8IUD6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF135Q8IUD6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.55
RNF135Q8IUD6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
RNF135Q8IUD6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF135Q8IUD6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF135Q8IUD6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RNF135Q8IUD6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF135Q8IUD6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF135Q8IUD6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF135Q8IUD6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF135Q8IUD6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
RNF135Q8IUD6 AC105265.2-201ENST00000467189 838 ntBASIC24.68■■□□□ 1.54
RNF135Q8IUD6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.68■■□□□ 1.54
RNF135Q8IUD6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF135Q8IUD6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 EDA-201ENST00000338901 1233 ntBASIC24.67■■□□□ 1.54
RNF135Q8IUD6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 AL355001.2-201ENST00000620617 1191 ntBASIC24.67■■□□□ 1.54
RNF135Q8IUD6 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF135Q8IUD6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 MIR6821-201ENST00000617625 74 ntBASIC24.66■■□□□ 1.54
RNF135Q8IUD6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF135Q8IUD6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF135Q8IUD6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF135Q8IUD6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF135Q8IUD6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RNF135Q8IUD6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF135Q8IUD6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF135Q8IUD6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms