Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF546Q86UE3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF546Q86UE3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF546Q86UE3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF546Q86UE3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF546Q86UE3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.33■□□□□ 0.69
ZNF546Q86UE3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.33■□□□□ 0.69
ZNF546Q86UE3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
ZNF546Q86UE3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF546Q86UE3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF546Q86UE3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZNF546Q86UE3 AC110285.7-201ENST00000624417 1536 ntBASIC19.3■□□□□ 0.68
ZNF546Q86UE3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF546Q86UE3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 AC137767.1-201ENST00000602918 1920 ntBASIC19.29■□□□□ 0.68
ZNF546Q86UE3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF546Q86UE3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 C1orf229-201ENST00000623686 2258 ntBASIC19.28■□□□□ 0.68
ZNF546Q86UE3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF546Q86UE3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF546Q86UE3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF546Q86UE3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF546Q86UE3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF546Q86UE3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
ZNF546Q86UE3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 DUX4L28-201ENST00000623687 678 ntBASIC19.26■□□□□ 0.67
ZNF546Q86UE3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF546Q86UE3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF546Q86UE3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms