Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.29■■□□□ 1.32
LDB1Q86U70 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LDB1Q86U70 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LDB1Q86U70 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LDB1Q86U70 AC139795.1-202ENST00000500444 432 ntBASIC23.29■■□□□ 1.32
LDB1Q86U70 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LDB1Q86U70 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
LDB1Q86U70 HLA-L-211ENST00000482052 1765 ntBASIC23.29■■□□□ 1.32
LDB1Q86U70 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LDB1Q86U70 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LDB1Q86U70 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.28■■□□□ 1.32
LDB1Q86U70 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LDB1Q86U70 TSPY13P-201ENST00000338964 914 ntBASIC23.28■■□□□ 1.32
LDB1Q86U70 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LDB1Q86U70 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LDB1Q86U70 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LDB1Q86U70 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
LDB1Q86U70 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LDB1Q86U70 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.27■■□□□ 1.32
LDB1Q86U70 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LDB1Q86U70 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LDB1Q86U70 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.27■■□□□ 1.32
LDB1Q86U70 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.27■■□□□ 1.32
LDB1Q86U70 AL033527.3-201ENST00000566366 1196 ntBASIC23.27■■□□□ 1.32
LDB1Q86U70 BHLHE23-202ENST00000612929 1109 ntBASIC23.27■■□□□ 1.32
LDB1Q86U70 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LDB1Q86U70 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LDB1Q86U70 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.27■■□□□ 1.32
LDB1Q86U70 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LDB1Q86U70 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.27■■□□□ 1.32
LDB1Q86U70 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LDB1Q86U70 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
LDB1Q86U70 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
LDB1Q86U70 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LDB1Q86U70 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.26■■□□□ 1.31
LDB1Q86U70 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LDB1Q86U70 AC012354.3-201ENST00000623734 483 ntBASIC23.26■■□□□ 1.31
LDB1Q86U70 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.26■■□□□ 1.31
LDB1Q86U70 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LDB1Q86U70 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LDB1Q86U70 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 AL592295.1-201ENST00000400984 884 ntBASIC23.25■■□□□ 1.31
LDB1Q86U70 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.25■■□□□ 1.31
LDB1Q86U70 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LDB1Q86U70 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.24■■□□□ 1.31
LDB1Q86U70 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.24■■□□□ 1.31
LDB1Q86U70 PVT1_1.1-201ENST00000615125 194 ntBASIC23.24■■□□□ 1.31
LDB1Q86U70 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
LDB1Q86U70 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LDB1Q86U70 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LDB1Q86U70 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LDB1Q86U70 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
LDB1Q86U70 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.23■■□□□ 1.31
LDB1Q86U70 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.23■■□□□ 1.31
LDB1Q86U70 AC010980.1-201ENST00000587192 1142 ntBASIC23.23■■□□□ 1.31
LDB1Q86U70 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.23■■□□□ 1.31
LDB1Q86U70 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LDB1Q86U70 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LDB1Q86U70 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.22■■□□□ 1.31
LDB1Q86U70 LINC00543-201ENST00000567234 1845 ntBASIC23.22■■□□□ 1.31
LDB1Q86U70 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LDB1Q86U70 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LDB1Q86U70 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LDB1Q86U70 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
LDB1Q86U70 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.21■■□□□ 1.31
LDB1Q86U70 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.21■■□□□ 1.31
LDB1Q86U70 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LDB1Q86U70 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
LDB1Q86U70 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.21■■□□□ 1.31
LDB1Q86U70 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LDB1Q86U70 AC090877.2-201ENST00000558441 1738 ntBASIC23.2■■□□□ 1.3
LDB1Q86U70 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
LDB1Q86U70 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.2■■□□□ 1.3
LDB1Q86U70 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LDB1Q86U70 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LDB1Q86U70 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
LDB1Q86U70 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LDB1Q86U70 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.2■■□□□ 1.3
LDB1Q86U70 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LDB1Q86U70 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.19■■□□□ 1.3
LDB1Q86U70 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.19■■□□□ 1.3
LDB1Q86U70 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.19■■□□□ 1.3
LDB1Q86U70 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.19■■□□□ 1.3
LDB1Q86U70 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms