Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SSX6Q7RTT6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSX6Q7RTT6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SSX6Q7RTT6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
SSX6Q7RTT6 AC012676.1-201ENST00000574705 1949 ntBASIC20.74■□□□□ 0.91
SSX6Q7RTT6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX6Q7RTT6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX6Q7RTT6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.72■□□□□ 0.91
SSX6Q7RTT6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX6Q7RTT6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 RP9P-202ENST00000450133 1212 ntBASIC20.71■□□□□ 0.91
SSX6Q7RTT6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX6Q7RTT6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SSX6Q7RTT6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 AC093536.1-201ENST00000569153 554 ntBASIC20.7■□□□□ 0.9
SSX6Q7RTT6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX6Q7RTT6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.69■□□□□ 0.9
SSX6Q7RTT6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSX6Q7RTT6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX6Q7RTT6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSX6Q7RTT6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX6Q7RTT6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms