Protein–RNA interactions for Protein: Q6PKG0

LARP1, La-related protein 1, humanhuman

Known RBP Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1Q6PKG0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.37■■■□□ 2.61
LARP1Q6PKG0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
LARP1Q6PKG0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.36■■■□□ 2.61
LARP1Q6PKG0 MIR939-201ENST00000401314 82 ntBASIC31.36■■■□□ 2.61
LARP1Q6PKG0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.36■■■□□ 2.61
LARP1Q6PKG0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LARP1Q6PKG0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LARP1Q6PKG0 MIR6821-201ENST00000617625 74 ntBASIC31.35■■■□□ 2.61
LARP1Q6PKG0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
LARP1Q6PKG0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LARP1Q6PKG0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 AP001330.3-201ENST00000520123 633 ntBASIC31.33■■■□□ 2.61
LARP1Q6PKG0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
LARP1Q6PKG0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
LARP1Q6PKG0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
LARP1Q6PKG0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LARP1Q6PKG0 AC090877.2-201ENST00000558441 1738 ntBASIC31.3■■■□□ 2.6
LARP1Q6PKG0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LARP1Q6PKG0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LARP1Q6PKG0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.3■■■□□ 2.6
LARP1Q6PKG0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LARP1Q6PKG0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LARP1Q6PKG0 AC097381.1-201ENST00000429019 1296 ntBASIC31.29■■■□□ 2.6
LARP1Q6PKG0 AC087623.3-201ENST00000607047 1098 ntBASIC31.29■■■□□ 2.6
LARP1Q6PKG0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LARP1Q6PKG0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LARP1Q6PKG0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LARP1Q6PKG0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LARP1Q6PKG0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.28■■■□□ 2.6
LARP1Q6PKG0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LARP1Q6PKG0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
LARP1Q6PKG0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.27■■■□□ 2.6
LARP1Q6PKG0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LARP1Q6PKG0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.26■■■□□ 2.6
LARP1Q6PKG0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
LARP1Q6PKG0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.26■■■□□ 2.59
LARP1Q6PKG0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
LARP1Q6PKG0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
LARP1Q6PKG0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 AL162430.1-201ENST00000480705 870 ntBASIC31.25■■■□□ 2.59
LARP1Q6PKG0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.25■■■□□ 2.59
LARP1Q6PKG0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LARP1Q6PKG0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.23■■■□□ 2.59
LARP1Q6PKG0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LARP1Q6PKG0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
LARP1Q6PKG0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.23■■■□□ 2.59
LARP1Q6PKG0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LARP1Q6PKG0 AC091305.1-201ENST00000479476 895 ntBASIC31.22■■■□□ 2.59
LARP1Q6PKG0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LARP1Q6PKG0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 AC142086.6-201ENST00000621154 1765 ntBASIC31.21■■■□□ 2.59
LARP1Q6PKG0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.21■■■□□ 2.59
LARP1Q6PKG0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LARP1Q6PKG0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LARP1Q6PKG0 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.2■■■□□ 2.59
LARP1Q6PKG0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
LARP1Q6PKG0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
LARP1Q6PKG0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
LARP1Q6PKG0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.19■■■□□ 2.58
LARP1Q6PKG0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.19■■■□□ 2.58
LARP1Q6PKG0 MIR4767-201ENST00000582827 78 ntBASIC31.19■■■□□ 2.58
LARP1Q6PKG0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.18■■■□□ 2.58
LARP1Q6PKG0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LARP1Q6PKG0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms