Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR1Q6PIV2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.14■■□□□ 1.46
FOXR1Q6PIV2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR1Q6PIV2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR1Q6PIV2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR1Q6PIV2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR1Q6PIV2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR1Q6PIV2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR1Q6PIV2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 DUX4L18-201ENST00000553347 1267 ntBASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR1Q6PIV2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 EP400NL-214ENST00000641289 2402 ntBASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR1Q6PIV2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXR1Q6PIV2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 AL117328.2-201ENST00000624617 1940 ntBASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR1Q6PIV2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR1Q6PIV2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR1Q6PIV2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR1Q6PIV2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR1Q6PIV2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
FOXR1Q6PIV2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXR1Q6PIV2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
FOXR1Q6PIV2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.07■■□□□ 1.44
FOXR1Q6PIV2 AL157400.5-201ENST00000507624 621 ntBASIC24.07■■□□□ 1.44
FOXR1Q6PIV2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 AC133552.2-201ENST00000619106 1032 ntBASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXR1Q6PIV2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 AC007029.1-201ENST00000604183 313 ntBASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 AC129492.7-201ENST00000622992 756 ntBASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.05■■□□□ 1.44
FOXR1Q6PIV2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms