Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 ABHD17AP5-201ENST00000580133 923 ntBASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 RAP2CP1-202ENST00000605179 643 ntBASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 AC009831.1-201ENST00000580420 1582 ntBASIC21.1■□□□□ 0.97
TMEM53Q6P2H8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM53Q6P2H8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM53Q6P2H8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM53Q6P2H8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM53Q6P2H8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM53Q6P2H8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM53Q6P2H8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.96
TMEM53Q6P2H8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM53Q6P2H8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 ABCB10P4-201ENST00000566803 2184 ntBASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM53Q6P2H8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM53Q6P2H8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM53Q6P2H8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 AC010501.1-201ENST00000606270 1962 ntBASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM53Q6P2H8 DUSP8P4-201ENST00000399538 1761 ntBASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 U85056.1-201ENST00000616429 682 ntBASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM53Q6P2H8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM53Q6P2H8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 AL592293.1-201ENST00000502889 1188 ntBASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM53Q6P2H8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM53Q6P2H8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM53Q6P2H8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM53Q6P2H8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
TMEM53Q6P2H8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
TMEM53Q6P2H8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM53Q6P2H8 NTF6A-201ENST00000591175 560 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms