Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC32.41■■■□□ 2.78
CDCA8Q53HL2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.41■■■□□ 2.78
CDCA8Q53HL2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.41■■■□□ 2.78
CDCA8Q53HL2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CDCA8Q53HL2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDCA8Q53HL2 AC092028.1-203ENST00000608262 953 ntBASIC32.4■■■□□ 2.78
CDCA8Q53HL2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDCA8Q53HL2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDCA8Q53HL2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CDCA8Q53HL2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CDCA8Q53HL2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CDCA8Q53HL2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
CDCA8Q53HL2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.35■■■□□ 2.77
CDCA8Q53HL2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDCA8Q53HL2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDCA8Q53HL2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
CDCA8Q53HL2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDCA8Q53HL2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.32■■■□□ 2.76
CDCA8Q53HL2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC32.32■■■□□ 2.76
CDCA8Q53HL2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.32■■■□□ 2.76
CDCA8Q53HL2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.31■■■□□ 2.76
CDCA8Q53HL2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.31■■■□□ 2.76
CDCA8Q53HL2 UNC93B8-201ENST00000511903 705 ntBASIC32.31■■■□□ 2.76
CDCA8Q53HL2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
CDCA8Q53HL2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC32.3■■■□□ 2.76
CDCA8Q53HL2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDCA8Q53HL2 AL356441.2-201ENST00000443009 864 ntBASIC32.3■■■□□ 2.76
CDCA8Q53HL2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
CDCA8Q53HL2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
CDCA8Q53HL2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.29■■■□□ 2.76
CDCA8Q53HL2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CDCA8Q53HL2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.29■■■□□ 2.76
CDCA8Q53HL2 AC022211.4-201ENST00000625094 2161 ntBASIC32.28■■■□□ 2.76
CDCA8Q53HL2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.28■■■□□ 2.76
CDCA8Q53HL2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.28■■■□□ 2.76
CDCA8Q53HL2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.28■■■□□ 2.76
CDCA8Q53HL2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CDCA8Q53HL2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CDCA8Q53HL2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CDCA8Q53HL2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CDCA8Q53HL2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDCA8Q53HL2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CDCA8Q53HL2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDCA8Q53HL2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC32.26■■■□□ 2.76
CDCA8Q53HL2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDCA8Q53HL2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDCA8Q53HL2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDCA8Q53HL2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
CDCA8Q53HL2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.26■■■□□ 2.75
CDCA8Q53HL2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC32.26■■■□□ 2.75
CDCA8Q53HL2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.26■■■□□ 2.75
CDCA8Q53HL2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CDCA8Q53HL2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.25■■■□□ 2.75
CDCA8Q53HL2 TSPY9P-201ENST00000440215 945 ntBASIC32.25■■■□□ 2.75
CDCA8Q53HL2 TSPY11P-201ENST00000442607 1045 ntBASIC32.25■■■□□ 2.75
CDCA8Q53HL2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.25■■■□□ 2.75
CDCA8Q53HL2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.25■■■□□ 2.75
CDCA8Q53HL2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms