Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01554Q52M75 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01554Q52M75 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01554Q52M75 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01554Q52M75 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01554Q52M75 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01554Q52M75 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
LINC01554Q52M75 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01554Q52M75 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
LINC01554Q52M75 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01554Q52M75 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 AL133380.1-201ENST00000506013 324 ntBASIC11.63□□□□□ -0.55
LINC01554Q52M75 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01554Q52M75 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01554Q52M75 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LINC01554Q52M75 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01554Q52M75 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01554Q52M75 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01554Q52M75 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
LINC01554Q52M75 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01554Q52M75 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01554Q52M75 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01554Q52M75 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms