Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST3H3Q16695 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST3H3Q16695 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST3H3Q16695 LINC01124-201ENST00000409786 2117 ntBASIC20.68■□□□□ 0.9
HIST3H3Q16695 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
HIST3H3Q16695 LINC00543-201ENST00000567234 1845 ntBASIC20.67■□□□□ 0.9
HIST3H3Q16695 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST3H3Q16695 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.67■□□□□ 0.9
HIST3H3Q16695 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST3H3Q16695 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST3H3Q16695 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HIST3H3Q16695 HLA-L-211ENST00000482052 1765 ntBASIC20.67■□□□□ 0.9
HIST3H3Q16695 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HIST3H3Q16695 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST3H3Q16695 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H3Q16695 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H3Q16695 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H3Q16695 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H3Q16695 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H3Q16695 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H3Q16695 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 AC141586.4-201ENST00000624558 1573 ntBASIC20.65■□□□□ 0.9
HIST3H3Q16695 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H3Q16695 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST3H3Q16695 BHLHE23-202ENST00000612929 1109 ntBASIC20.65■□□□□ 0.9
HIST3H3Q16695 PVT1_1.1-201ENST00000615125 194 ntBASIC20.65■□□□□ 0.9
HIST3H3Q16695 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HIST3H3Q16695 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.64■□□□□ 0.9
HIST3H3Q16695 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HIST3H3Q16695 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.64■□□□□ 0.9
HIST3H3Q16695 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 AL033527.3-201ENST00000566366 1196 ntBASIC20.64■□□□□ 0.89
HIST3H3Q16695 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST3H3Q16695 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST3H3Q16695 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST3H3Q16695 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HIST3H3Q16695 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST3H3Q16695 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H3Q16695 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H3Q16695 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H3Q16695 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H3Q16695 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
HIST3H3Q16695 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST3H3Q16695 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST3H3Q16695 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST3H3Q16695 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HIST3H3Q16695 AC011551.1-201ENST00000614101 683 ntBASIC20.62■□□□□ 0.89
HIST3H3Q16695 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.62■□□□□ 0.89
HIST3H3Q16695 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST3H3Q16695 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST3H3Q16695 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST3H3Q16695 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H3Q16695 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H3Q16695 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HIST3H3Q16695 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST3H3Q16695 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H3Q16695 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H3Q16695 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
HIST3H3Q16695 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H3Q16695 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST3H3Q16695 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST3H3Q16695 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST3H3Q16695 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.6■□□□□ 0.89
HIST3H3Q16695 AC010980.1-201ENST00000587192 1142 ntBASIC20.6■□□□□ 0.89
HIST3H3Q16695 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST3H3Q16695 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST3H3Q16695 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST3H3Q16695 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST3H3Q16695 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST3H3Q16695 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST3H3Q16695 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HIST3H3Q16695 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST3H3Q16695 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HIST3H3Q16695 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST3H3Q16695 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST3H3Q16695 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST3H3Q16695 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST3H3Q16695 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.58■□□□□ 0.88
HIST3H3Q16695 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HIST3H3Q16695 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H3Q16695 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H3Q16695 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HIST3H3Q16695 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H3Q16695 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H3Q16695 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST3H3Q16695 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HIST3H3Q16695 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST3H3Q16695 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST3H3Q16695 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST3H3Q16695 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
HIST3H3Q16695 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms