Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H3AP68431 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H3AP68431 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H3AP68431 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H3AP68431 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST1H3AP68431 AC090877.2-201ENST00000558441 1738 ntBASIC20.41■□□□□ 0.86
HIST1H3AP68431 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H3AP68431 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H3AP68431 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H3AP68431 DUX4L18-201ENST00000553347 1267 ntBASIC20.41■□□□□ 0.86
HIST1H3AP68431 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H3AP68431 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H3AP68431 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST1H3AP68431 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST1H3AP68431 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H3AP68431 AC004987.1-201ENST00000428627 508 ntBASIC20.4■□□□□ 0.86
HIST1H3AP68431 ATP5G2P3-201ENST00000429083 425 ntBASIC20.4■□□□□ 0.86
HIST1H3AP68431 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.4■□□□□ 0.86
HIST1H3AP68431 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H3AP68431 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H3AP68431 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.4■□□□□ 0.86
HIST1H3AP68431 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H3AP68431 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H3AP68431 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H3AP68431 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H3AP68431 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H3AP68431 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H3AP68431 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H3AP68431 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H3AP68431 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HIST1H3AP68431 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H3AP68431 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.39■□□□□ 0.85
HIST1H3AP68431 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H3AP68431 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H3AP68431 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H3AP68431 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST1H3AP68431 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H3AP68431 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H3AP68431 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.37■□□□□ 0.85
HIST1H3AP68431 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H3AP68431 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H3AP68431 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HIST1H3AP68431 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.37■□□□□ 0.85
HIST1H3AP68431 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HIST1H3AP68431 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.36■□□□□ 0.85
HIST1H3AP68431 AC139795.1-202ENST00000500444 432 ntBASIC20.36■□□□□ 0.85
HIST1H3AP68431 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HIST1H3AP68431 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H3AP68431 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 AC022616.5-201ENST00000518796 181 ntBASIC20.35■□□□□ 0.85
HIST1H3AP68431 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.35■□□□□ 0.85
HIST1H3AP68431 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H3AP68431 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 TSPY13P-201ENST00000338964 914 ntBASIC20.34■□□□□ 0.85
HIST1H3AP68431 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.34■□□□□ 0.85
HIST1H3AP68431 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HIST1H3AP68431 AC074183.2-201ENST00000623112 922 ntBASIC20.34■□□□□ 0.85
HIST1H3AP68431 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST1H3AP68431 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H3AP68431 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H3AP68431 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.33■□□□□ 0.85
HIST1H3AP68431 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H3AP68431 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H3AP68431 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H3AP68431 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H3AP68431 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
HIST1H3AP68431 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H3AP68431 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H3AP68431 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms