Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB1AP62820 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB1AP62820 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB1AP62820 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RAB1AP62820 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB1AP62820 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB1AP62820 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
RAB1AP62820 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
RAB1AP62820 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1AP62820 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1AP62820 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1AP62820 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1AP62820 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB1AP62820 AC142381.3-201ENST00000568208 1670 ntBASIC20.46■□□□□ 0.87
RAB1AP62820 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB1AP62820 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB1AP62820 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1AP62820 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1AP62820 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAB1AP62820 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1AP62820 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB1AP62820 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RAB1AP62820 RARRES2P1-201ENST00000474487 481 ntBASIC20.45■□□□□ 0.86
RAB1AP62820 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1AP62820 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB1AP62820 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB1AP62820 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB1AP62820 AC090877.2-201ENST00000558441 1738 ntBASIC20.44■□□□□ 0.86
RAB1AP62820 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RAB1AP62820 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB1AP62820 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RAB1AP62820 KRT18P24-201ENST00000344739 1156 ntBASIC20.44■□□□□ 0.86
RAB1AP62820 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB1AP62820 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB1AP62820 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB1AP62820 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB1AP62820 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB1AP62820 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB1AP62820 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAB1AP62820 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RAB1AP62820 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB1AP62820 AC103724.3-201ENST00000564481 992 ntBASIC20.43■□□□□ 0.86
RAB1AP62820 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB1AP62820 THA1P-201ENST00000590384 1145 ntBASIC20.43■□□□□ 0.86
RAB1AP62820 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB1AP62820 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB1AP62820 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB1AP62820 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB1AP62820 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB1AP62820 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAB1AP62820 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1AP62820 AC120024.1-201ENST00000562672 995 ntBASIC20.42■□□□□ 0.86
RAB1AP62820 AC011551.1-201ENST00000614101 683 ntBASIC20.42■□□□□ 0.86
RAB1AP62820 MIR6089-201ENST00000616698 64 ntBASIC20.42■□□□□ 0.86
RAB1AP62820 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RAB1AP62820 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1AP62820 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB1AP62820 AC138932.3-201ENST00000567634 1902 ntBASIC20.41■□□□□ 0.86
RAB1AP62820 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAB1AP62820 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB1AP62820 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB1AP62820 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB1AP62820 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB1AP62820 AP003733.4-201ENST00000623785 1697 ntBASIC20.41■□□□□ 0.86
RAB1AP62820 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1AP62820 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1AP62820 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB1AP62820 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB1AP62820 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB1AP62820 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB1AP62820 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB1AP62820 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
RAB1AP62820 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
RAB1AP62820 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB1AP62820 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB1AP62820 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB1AP62820 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
RAB1AP62820 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB1AP62820 AL031848.2-201ENST00000607670 837 ntBASIC20.39■□□□□ 0.85
RAB1AP62820 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB1AP62820 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB1AP62820 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB1AP62820 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1AP62820 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms