Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN18P56856 UNC93B8-201ENST00000511903 705 ntBASIC20.95■□□□□ 0.94
CLDN18P56856 AC092028.1-203ENST00000608262 953 ntBASIC20.95■□□□□ 0.94
CLDN18P56856 MIR6089-201ENST00000616698 64 ntBASIC20.95■□□□□ 0.94
CLDN18P56856 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN18P56856 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN18P56856 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN18P56856 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN18P56856 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN18P56856 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN18P56856 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN18P56856 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLDN18P56856 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN18P56856 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN18P56856 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN18P56856 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN18P56856 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN18P56856 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN18P56856 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN18P56856 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLDN18P56856 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN18P56856 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN18P56856 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN18P56856 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CLDN18P56856 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN18P56856 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN18P56856 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN18P56856 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN18P56856 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN18P56856 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLDN18P56856 TSPY9P-201ENST00000440215 945 ntBASIC20.91■□□□□ 0.94
CLDN18P56856 TSPY11P-201ENST00000442607 1045 ntBASIC20.91■□□□□ 0.94
CLDN18P56856 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN18P56856 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN18P56856 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN18P56856 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN18P56856 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN18P56856 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN18P56856 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN18P56856 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLDN18P56856 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.9■□□□□ 0.94
CLDN18P56856 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN18P56856 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN18P56856 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CLDN18P56856 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN18P56856 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN18P56856 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN18P56856 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN18P56856 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.89■□□□□ 0.93
CLDN18P56856 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.89■□□□□ 0.93
CLDN18P56856 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN18P56856 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN18P56856 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN18P56856 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN18P56856 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN18P56856 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN18P56856 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLDN18P56856 KRT16P3-201ENST00000439127 1283 ntBASIC20.88■□□□□ 0.93
CLDN18P56856 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN18P56856 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.88■□□□□ 0.93
CLDN18P56856 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN18P56856 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN18P56856 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN18P56856 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN18P56856 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN18P56856 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN18P56856 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN18P56856 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN18P56856 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN18P56856 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN18P56856 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN18P56856 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN18P56856 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN18P56856 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN18P56856 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLDN18P56856 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN18P56856 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN18P56856 AC131212.1-201ENST00000613771 668 ntBASIC20.86■□□□□ 0.93
CLDN18P56856 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN18P56856 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN18P56856 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN18P56856 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLDN18P56856 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN18P56856 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN18P56856 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN18P56856 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN18P56856 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms