Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA1P56159 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA1P56159 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA1P56159 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA1P56159 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA1P56159 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA1P56159 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA1P56159 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.02■□□□□ 0.96
GFRA1P56159 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.02■□□□□ 0.96
GFRA1P56159 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.02■□□□□ 0.96
GFRA1P56159 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.02■□□□□ 0.96
GFRA1P56159 AC092028.1-203ENST00000608262 953 ntBASIC21.02■□□□□ 0.96
GFRA1P56159 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA1P56159 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GFRA1P56159 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GFRA1P56159 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA1P56159 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.01■□□□□ 0.95
GFRA1P56159 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA1P56159 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.01■□□□□ 0.95
GFRA1P56159 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
GFRA1P56159 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA1P56159 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA1P56159 UNC93B8-201ENST00000511903 705 ntBASIC21■□□□□ 0.95
GFRA1P56159 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
GFRA1P56159 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA1P56159 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
GFRA1P56159 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
GFRA1P56159 AL356441.2-201ENST00000443009 864 ntBASIC20.99■□□□□ 0.95
GFRA1P56159 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.99■□□□□ 0.95
GFRA1P56159 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.99■□□□□ 0.95
GFRA1P56159 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GFRA1P56159 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA1P56159 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA1P56159 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.98■□□□□ 0.95
GFRA1P56159 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.98■□□□□ 0.95
GFRA1P56159 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA1P56159 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.98■□□□□ 0.95
GFRA1P56159 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA1P56159 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.98■□□□□ 0.95
GFRA1P56159 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GFRA1P56159 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.98■□□□□ 0.95
GFRA1P56159 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA1P56159 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GFRA1P56159 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA1P56159 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.98■□□□□ 0.95
GFRA1P56159 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA1P56159 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GFRA1P56159 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.97■□□□□ 0.95
GFRA1P56159 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA1P56159 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
GFRA1P56159 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.97■□□□□ 0.95
GFRA1P56159 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.97■□□□□ 0.95
GFRA1P56159 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.97■□□□□ 0.95
GFRA1P56159 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA1P56159 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA1P56159 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA1P56159 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GFRA1P56159 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.96■□□□□ 0.95
GFRA1P56159 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GFRA1P56159 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.96■□□□□ 0.95
GFRA1P56159 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA1P56159 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA1P56159 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA1P56159 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
GFRA1P56159 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
GFRA1P56159 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.95■□□□□ 0.94
GFRA1P56159 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GFRA1P56159 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA1P56159 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.95■□□□□ 0.94
GFRA1P56159 TSPY9P-201ENST00000440215 945 ntBASIC20.95■□□□□ 0.94
GFRA1P56159 TSPY11P-201ENST00000442607 1045 ntBASIC20.95■□□□□ 0.94
GFRA1P56159 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
GFRA1P56159 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA1P56159 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.94■□□□□ 0.94
GFRA1P56159 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.94■□□□□ 0.94
GFRA1P56159 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA1P56159 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GFRA1P56159 AC022211.4-201ENST00000625094 2161 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms