Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN4P51793 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN4P51793 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.78■■□□□ 1.56
CLCN4P51793 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.77■■□□□ 1.56
CLCN4P51793 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN4P51793 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN4P51793 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.77■■□□□ 1.56
CLCN4P51793 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN4P51793 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.77■■□□□ 1.56
CLCN4P51793 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN4P51793 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.77■■□□□ 1.56
CLCN4P51793 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.77■■□□□ 1.56
CLCN4P51793 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.76■■□□□ 1.55
CLCN4P51793 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CLCN4P51793 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN4P51793 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN4P51793 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.76■■□□□ 1.55
CLCN4P51793 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CLCN4P51793 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN4P51793 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN4P51793 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN4P51793 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.75■■□□□ 1.55
CLCN4P51793 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN4P51793 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CLCN4P51793 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.74■■□□□ 1.55
CLCN4P51793 AC106739.1-201ENST00000617035 715 ntBASIC24.74■■□□□ 1.55
CLCN4P51793 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN4P51793 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.74■■□□□ 1.55
CLCN4P51793 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN4P51793 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN4P51793 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN4P51793 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN4P51793 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN4P51793 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN4P51793 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN4P51793 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN4P51793 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.73■■□□□ 1.55
CLCN4P51793 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN4P51793 AC096887.2-201ENST00000623443 1957 ntBASIC24.73■■□□□ 1.55
CLCN4P51793 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN4P51793 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CLCN4P51793 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN4P51793 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN4P51793 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.72■■□□□ 1.55
CLCN4P51793 PBX2P1-201ENST00000493219 1291 ntBASIC24.72■■□□□ 1.55
CLCN4P51793 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.72■■□□□ 1.55
CLCN4P51793 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.72■■□□□ 1.55
CLCN4P51793 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLCN4P51793 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN4P51793 AC097639.1-201ENST00000565519 1891 ntBASIC24.71■■□□□ 1.55
CLCN4P51793 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLCN4P51793 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
CLCN4P51793 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN4P51793 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.7■■□□□ 1.54
CLCN4P51793 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLCN4P51793 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CLCN4P51793 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN4P51793 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLCN4P51793 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.69■■□□□ 1.54
CLCN4P51793 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
CLCN4P51793 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.69■■□□□ 1.54
CLCN4P51793 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.69■■□□□ 1.54
CLCN4P51793 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.69■■□□□ 1.54
CLCN4P51793 ERN1-208ENST00000606895 2068 ntBASIC24.68■■□□□ 1.54
CLCN4P51793 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN4P51793 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CLCN4P51793 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLCN4P51793 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.68■■□□□ 1.54
CLCN4P51793 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CLCN4P51793 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CLCN4P51793 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.67■■□□□ 1.54
CLCN4P51793 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN4P51793 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLCN4P51793 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.66■■□□□ 1.54
CLCN4P51793 UNC93B3-201ENST00000308076 687 ntBASIC24.66■■□□□ 1.54
CLCN4P51793 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.66■■□□□ 1.54
CLCN4P51793 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.66■■□□□ 1.54
CLCN4P51793 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN4P51793 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CLCN4P51793 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.66■■□□□ 1.54
CLCN4P51793 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.66■■□□□ 1.54
CLCN4P51793 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN4P51793 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN4P51793 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.66■■□□□ 1.54
CLCN4P51793 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLCN4P51793 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
CLCN4P51793 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CLCN4P51793 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN4P51793 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.65■■□□□ 1.54
CLCN4P51793 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLCN4P51793 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CLCN4P51793 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CLCN4P51793 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.65■■□□□ 1.54
CLCN4P51793 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
CLCN4P51793 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLCN4P51793 ZNRF2P3-201ENST00000424200 374 ntBASIC24.64■■□□□ 1.54
CLCN4P51793 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CLCN4P51793 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CLCN4P51793 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLCN4P51793 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms