Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
KRT20P35900 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT20P35900 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
KRT20P35900 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
KRT20P35900 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.99■■□□□ 1.11
KRT20P35900 RPS2P7-201ENST00000447334 885 ntBASIC21.99■■□□□ 1.11
KRT20P35900 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 BHLHE23-202ENST00000612929 1109 ntBASIC21.99■■□□□ 1.11
KRT20P35900 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT20P35900 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
KRT20P35900 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT20P35900 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT20P35900 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT20P35900 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT20P35900 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT20P35900 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
KRT20P35900 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT20P35900 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT20P35900 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT20P35900 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT20P35900 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT20P35900 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT20P35900 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT20P35900 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT20P35900 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
KRT20P35900 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT20P35900 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT20P35900 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT20P35900 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT20P35900 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT20P35900 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT20P35900 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.11
KRT20P35900 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
KRT20P35900 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT20P35900 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT20P35900 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
KRT20P35900 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT20P35900 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 AL033527.3-201ENST00000566366 1196 ntBASIC21.94■■□□□ 1.1
KRT20P35900 AC087393.1-201ENST00000582896 145 ntBASIC21.94■■□□□ 1.1
KRT20P35900 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT20P35900 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT20P35900 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT20P35900 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KRT20P35900 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT20P35900 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT20P35900 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT20P35900 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT20P35900 AC012676.1-201ENST00000574705 1949 ntBASIC21.93■■□□□ 1.1
KRT20P35900 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRT20P35900 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRT20P35900 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT20P35900 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT20P35900 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
KRT20P35900 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT20P35900 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT20P35900 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT20P35900 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KRT20P35900 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KRT20P35900 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT20P35900 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT20P35900 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT20P35900 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT20P35900 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT20P35900 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.91■■□□□ 1.1
KRT20P35900 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT20P35900 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT20P35900 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT20P35900 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT20P35900 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT20P35900 LINC01124-201ENST00000409786 2117 ntBASIC21.9■■□□□ 1.1
KRT20P35900 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT20P35900 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT20P35900 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT20P35900 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRT20P35900 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms