Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACKR3P25106 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACKR3P25106 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.2■□□□□ 0.82
ACKR3P25106 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACKR3P25106 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACKR3P25106 MIR6765-201ENST00000614092 87 ntBASIC20.2■□□□□ 0.82
ACKR3P25106 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACKR3P25106 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 LINC00543-201ENST00000567234 1845 ntBASIC20.19■□□□□ 0.82
ACKR3P25106 KRT18P60-201ENST00000312876 1297 ntBASIC20.19■□□□□ 0.82
ACKR3P25106 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.19■□□□□ 0.82
ACKR3P25106 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 AC129492.7-201ENST00000622992 756 ntBASIC20.19■□□□□ 0.82
ACKR3P25106 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ACKR3P25106 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACKR3P25106 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 AC087393.1-201ENST00000582896 145 ntBASIC20.18■□□□□ 0.82
ACKR3P25106 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.18■□□□□ 0.82
ACKR3P25106 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACKR3P25106 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACKR3P25106 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACKR3P25106 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACKR3P25106 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ACKR3P25106 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
ACKR3P25106 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ACKR3P25106 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ACKR3P25106 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACKR3P25106 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACKR3P25106 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.16■□□□□ 0.82
ACKR3P25106 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.16■□□□□ 0.82
ACKR3P25106 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ACKR3P25106 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACKR3P25106 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.16■□□□□ 0.82
ACKR3P25106 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
ACKR3P25106 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.15■□□□□ 0.82
ACKR3P25106 ABHD17AP5-201ENST00000580133 923 ntBASIC20.15■□□□□ 0.82
ACKR3P25106 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 HLA-L-211ENST00000482052 1765 ntBASIC20.15■□□□□ 0.82
ACKR3P25106 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ACKR3P25106 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACKR3P25106 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ACKR3P25106 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACKR3P25106 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ACKR3P25106 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.14■□□□□ 0.81
ACKR3P25106 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACKR3P25106 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACKR3P25106 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.14■□□□□ 0.81
ACKR3P25106 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACKR3P25106 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
ACKR3P25106 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ACKR3P25106 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACKR3P25106 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ACKR3P25106 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
ACKR3P25106 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACKR3P25106 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACKR3P25106 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACKR3P25106 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACKR3P25106 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.12■□□□□ 0.81
ACKR3P25106 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.12■□□□□ 0.81
ACKR3P25106 AC141586.4-201ENST00000624558 1573 ntBASIC20.12■□□□□ 0.81
ACKR3P25106 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACKR3P25106 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.11■□□□□ 0.81
ACKR3P25106 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.11■□□□□ 0.81
ACKR3P25106 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.11■□□□□ 0.81
ACKR3P25106 NTF6A-201ENST00000591175 560 ntBASIC20.11■□□□□ 0.81
ACKR3P25106 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACKR3P25106 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACKR3P25106 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACKR3P25106 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACKR3P25106 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms