Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
COL8A2P25067 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.76■□□□□ 0.75
COL8A2P25067 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL8A2P25067 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.75■□□□□ 0.75
COL8A2P25067 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.75■□□□□ 0.75
COL8A2P25067 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COL8A2P25067 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.75■□□□□ 0.75
COL8A2P25067 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.75■□□□□ 0.75
COL8A2P25067 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
COL8A2P25067 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL8A2P25067 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.74■□□□□ 0.75
COL8A2P25067 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL8A2P25067 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL8A2P25067 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL8A2P25067 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL8A2P25067 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.74■□□□□ 0.75
COL8A2P25067 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.74■□□□□ 0.75
COL8A2P25067 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL8A2P25067 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.74■□□□□ 0.75
COL8A2P25067 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.74■□□□□ 0.75
COL8A2P25067 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL8A2P25067 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL8A2P25067 AC145676.1-201ENST00000514988 2004 ntBASIC19.73■□□□□ 0.75
COL8A2P25067 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
COL8A2P25067 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL8A2P25067 KRT16P3-201ENST00000439127 1283 ntBASIC19.73■□□□□ 0.75
COL8A2P25067 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.73■□□□□ 0.75
COL8A2P25067 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.73■□□□□ 0.75
COL8A2P25067 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.73■□□□□ 0.75
COL8A2P25067 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.73■□□□□ 0.75
COL8A2P25067 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL8A2P25067 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL8A2P25067 AF131216.4-201ENST00000638924 1588 ntBASIC19.73■□□□□ 0.75
COL8A2P25067 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL8A2P25067 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL8A2P25067 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.72■□□□□ 0.75
COL8A2P25067 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
COL8A2P25067 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL8A2P25067 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL8A2P25067 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.72■□□□□ 0.75
COL8A2P25067 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.72■□□□□ 0.75
COL8A2P25067 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL8A2P25067 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL8A2P25067 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.71■□□□□ 0.75
COL8A2P25067 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL8A2P25067 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
COL8A2P25067 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL8A2P25067 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.7■□□□□ 0.74
COL8A2P25067 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL8A2P25067 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.7■□□□□ 0.74
COL8A2P25067 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL8A2P25067 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.69■□□□□ 0.74
COL8A2P25067 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL8A2P25067 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.69■□□□□ 0.74
COL8A2P25067 SLC6A10P-202ENST00000431994 2058 ntBASIC19.69■□□□□ 0.74
COL8A2P25067 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.68■□□□□ 0.74
COL8A2P25067 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
COL8A2P25067 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL8A2P25067 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL8A2P25067 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL8A2P25067 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL8A2P25067 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL8A2P25067 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.68■□□□□ 0.74
COL8A2P25067 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL8A2P25067 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL8A2P25067 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL8A2P25067 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.67■□□□□ 0.74
COL8A2P25067 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.67■□□□□ 0.74
COL8A2P25067 AC010997.5-201ENST00000609182 354 ntBASIC19.67■□□□□ 0.74
COL8A2P25067 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL8A2P25067 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL8A2P25067 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL8A2P25067 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL8A2P25067 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
COL8A2P25067 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
COL8A2P25067 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.66■□□□□ 0.74
COL8A2P25067 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.66■□□□□ 0.74
COL8A2P25067 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.66■□□□□ 0.74
COL8A2P25067 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL8A2P25067 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL8A2P25067 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL8A2P25067 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL8A2P25067 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL8A2P25067 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL8A2P25067 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL8A2P25067 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL8A2P25067 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.65■□□□□ 0.74
COL8A2P25067 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.65■□□□□ 0.74
COL8A2P25067 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms