Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSR1P21757 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSR1P21757 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSR1P21757 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MSR1P21757 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MSR1P21757 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSR1P21757 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.58■□□□□ 0.88
MSR1P21757 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
MSR1P21757 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSR1P21757 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSR1P21757 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSR1P21757 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSR1P21757 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSR1P21757 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSR1P21757 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MSR1P21757 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MSR1P21757 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MSR1P21757 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.56■□□□□ 0.88
MSR1P21757 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSR1P21757 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSR1P21757 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MSR1P21757 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MSR1P21757 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.55■□□□□ 0.88
MSR1P21757 TSPY13P-201ENST00000338964 914 ntBASIC20.55■□□□□ 0.88
MSR1P21757 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MSR1P21757 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.55■□□□□ 0.88
MSR1P21757 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.55■□□□□ 0.88
MSR1P21757 AC019171.1-201ENST00000601251 1056 ntBASIC20.55■□□□□ 0.88
MSR1P21757 BHLHE23-202ENST00000612929 1109 ntBASIC20.55■□□□□ 0.88
MSR1P21757 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.55■□□□□ 0.88
MSR1P21757 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.54■□□□□ 0.88
MSR1P21757 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.54■□□□□ 0.88
MSR1P21757 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSR1P21757 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.54■□□□□ 0.88
MSR1P21757 AC012354.3-201ENST00000623734 483 ntBASIC20.54■□□□□ 0.88
MSR1P21757 AC141586.4-201ENST00000624558 1573 ntBASIC20.54■□□□□ 0.88
MSR1P21757 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSR1P21757 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.54■□□□□ 0.88
MSR1P21757 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 AC090877.2-201ENST00000558441 1738 ntBASIC20.53■□□□□ 0.88
MSR1P21757 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.53■□□□□ 0.88
MSR1P21757 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.53■□□□□ 0.88
MSR1P21757 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.53■□□□□ 0.88
MSR1P21757 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MSR1P21757 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 LINC00543-201ENST00000567234 1845 ntBASIC20.53■□□□□ 0.88
MSR1P21757 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSR1P21757 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
MSR1P21757 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSR1P21757 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSR1P21757 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.52■□□□□ 0.88
MSR1P21757 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSR1P21757 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSR1P21757 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSR1P21757 AC074183.2-201ENST00000623112 922 ntBASIC20.52■□□□□ 0.88
MSR1P21757 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MSR1P21757 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
MSR1P21757 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
MSR1P21757 HLA-L-211ENST00000482052 1765 ntBASIC20.51■□□□□ 0.87
MSR1P21757 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MSR1P21757 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MSR1P21757 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MSR1P21757 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSR1P21757 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MSR1P21757 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.5■□□□□ 0.87
MSR1P21757 AC022616.5-201ENST00000518796 181 ntBASIC20.5■□□□□ 0.87
MSR1P21757 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MSR1P21757 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MSR1P21757 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MSR1P21757 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
MSR1P21757 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MSR1P21757 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MSR1P21757 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
MSR1P21757 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MSR1P21757 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MSR1P21757 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MSR1P21757 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.49■□□□□ 0.87
MSR1P21757 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.48■□□□□ 0.87
MSR1P21757 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.48■□□□□ 0.87
MSR1P21757 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MSR1P21757 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MSR1P21757 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms