Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF1P18846 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF1P18846 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.45■□□□□ 0.86
ATF1P18846 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF1P18846 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF1P18846 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ATF1P18846 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF1P18846 ECEL1P2-201ENST00000461596 1295 ntBASIC20.44■□□□□ 0.86
ATF1P18846 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF1P18846 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
ATF1P18846 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF1P18846 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF1P18846 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF1P18846 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATF1P18846 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.43■□□□□ 0.86
ATF1P18846 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF1P18846 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ATF1P18846 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF1P18846 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.43■□□□□ 0.86
ATF1P18846 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF1P18846 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.42■□□□□ 0.86
ATF1P18846 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 AC022413.1-201ENST00000624602 984 ntBASIC20.42■□□□□ 0.86
ATF1P18846 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.42■□□□□ 0.86
ATF1P18846 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
ATF1P18846 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF1P18846 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATF1P18846 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.41■□□□□ 0.86
ATF1P18846 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.41■□□□□ 0.86
ATF1P18846 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF1P18846 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
ATF1P18846 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 RP9P-202ENST00000450133 1212 ntBASIC20.4■□□□□ 0.86
ATF1P18846 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.4■□□□□ 0.86
ATF1P18846 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.4■□□□□ 0.86
ATF1P18846 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.4■□□□□ 0.86
ATF1P18846 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF1P18846 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATF1P18846 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF1P18846 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.39■□□□□ 0.86
ATF1P18846 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.39■□□□□ 0.86
ATF1P18846 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF1P18846 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATF1P18846 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF1P18846 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
ATF1P18846 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
ATF1P18846 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATF1P18846 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.39■□□□□ 0.85
ATF1P18846 CLDN5-201ENST00000403084 2357 ntBASIC20.39■□□□□ 0.85
ATF1P18846 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF1P18846 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.39■□□□□ 0.85
ATF1P18846 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF1P18846 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF1P18846 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATF1P18846 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF1P18846 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF1P18846 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF1P18846 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
ATF1P18846 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF1P18846 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF1P18846 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ATF1P18846 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATF1P18846 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.37■□□□□ 0.85
ATF1P18846 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.37■□□□□ 0.85
ATF1P18846 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF1P18846 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF1P18846 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATF1P18846 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 MIR6089-201ENST00000616698 64 ntBASIC20.36■□□□□ 0.85
ATF1P18846 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.36■□□□□ 0.85
ATF1P18846 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF1P18846 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATF1P18846 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATF1P18846 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATF1P18846 AC093536.1-201ENST00000569153 554 ntBASIC20.35■□□□□ 0.85
ATF1P18846 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATF1P18846 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms