Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.87■□□□□ 0.93
MRPL3P09001 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.87■□□□□ 0.93
MRPL3P09001 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL3P09001 RP9P-202ENST00000450133 1212 ntBASIC20.87■□□□□ 0.93
MRPL3P09001 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL3P09001 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL3P09001 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MRPL3P09001 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MRPL3P09001 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.86■□□□□ 0.93
MRPL3P09001 AC093536.1-201ENST00000569153 554 ntBASIC20.86■□□□□ 0.93
MRPL3P09001 MIR7108-201ENST00000614319 87 ntBASIC20.86■□□□□ 0.93
MRPL3P09001 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.86■□□□□ 0.93
MRPL3P09001 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.85■□□□□ 0.93
MRPL3P09001 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
MRPL3P09001 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.85■□□□□ 0.93
MRPL3P09001 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MRPL3P09001 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.85■□□□□ 0.93
MRPL3P09001 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
MRPL3P09001 AC068473.5-201ENST00000616428 2072 ntBASIC20.84■□□□□ 0.93
MRPL3P09001 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
MRPL3P09001 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL3P09001 AC022413.1-201ENST00000624602 984 ntBASIC20.84■□□□□ 0.93
MRPL3P09001 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.84■□□□□ 0.93
MRPL3P09001 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.83■□□□□ 0.93
MRPL3P09001 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MRPL3P09001 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL3P09001 ECEL1P2-201ENST00000461596 1295 ntBASIC20.83■□□□□ 0.93
MRPL3P09001 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.83■□□□□ 0.93
MRPL3P09001 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.83■□□□□ 0.93
MRPL3P09001 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
MRPL3P09001 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL3P09001 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
MRPL3P09001 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL3P09001 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
MRPL3P09001 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
MRPL3P09001 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL3P09001 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL3P09001 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
MRPL3P09001 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.82■□□□□ 0.92
MRPL3P09001 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL3P09001 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL3P09001 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
MRPL3P09001 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL3P09001 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
MRPL3P09001 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL3P09001 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MRPL3P09001 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.81■□□□□ 0.92
MRPL3P09001 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL3P09001 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
MRPL3P09001 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MRPL3P09001 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
MRPL3P09001 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL3P09001 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPL3P09001 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL3P09001 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL3P09001 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL3P09001 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.8■□□□□ 0.92
MRPL3P09001 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MRPL3P09001 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL3P09001 DUSP8P5-201ENST00000422884 1815 ntBASIC20.8■□□□□ 0.92
MRPL3P09001 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
MRPL3P09001 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL3P09001 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL3P09001 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.79■□□□□ 0.92
MRPL3P09001 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.79■□□□□ 0.92
MRPL3P09001 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL3P09001 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MRPL3P09001 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL3P09001 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL3P09001 AC012676.1-201ENST00000574705 1949 ntBASIC20.78■□□□□ 0.92
MRPL3P09001 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL3P09001 MIR639-201ENST00000384974 98 ntBASIC20.78■□□□□ 0.92
MRPL3P09001 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
MRPL3P09001 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL3P09001 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MRPL3P09001 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL3P09001 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.77■□□□□ 0.92
MRPL3P09001 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MRPL3P09001 FOXO3B-201ENST00000395675 1928 ntBASIC20.77■□□□□ 0.92
MRPL3P09001 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL3P09001 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL3P09001 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.77■□□□□ 0.92
MRPL3P09001 AC007029.1-201ENST00000604183 313 ntBASIC20.77■□□□□ 0.92
MRPL3P09001 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.77■□□□□ 0.92
MRPL3P09001 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MRPL3P09001 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL3P09001 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MRPL3P09001 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms