Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.87□□□□□ -0.03
APOBP04114 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOBP04114 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBP04114 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBP04114 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBP04114 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBP04114 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBP04114 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBP04114 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBP04114 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBP04114 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBP04114 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOBP04114 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBP04114 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBP04114 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBP04114 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBP04114 DRD5P2-201ENST00000421395 2012 ntBASIC14.85□□□□□ -0.03
APOBP04114 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.85□□□□□ -0.03
APOBP04114 MIR4767-201ENST00000582827 78 ntBASIC14.85□□□□□ -0.03
APOBP04114 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBP04114 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBP04114 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
APOBP04114 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOBP04114 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOBP04114 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOBP04114 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOBP04114 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.84□□□□□ -0.03
APOBP04114 AC034268.1-201ENST00000441047 882 ntBASIC14.84□□□□□ -0.03
APOBP04114 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.84□□□□□ -0.03
APOBP04114 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOBP04114 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.83□□□□□ -0.03
APOBP04114 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOBP04114 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBP04114 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOBP04114 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBP04114 FOXO3B-201ENST00000395675 1928 ntBASIC14.83□□□□□ -0.04
APOBP04114 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.83□□□□□ -0.04
APOBP04114 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOBP04114 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC14.83□□□□□ -0.04
APOBP04114 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBP04114 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.82□□□□□ -0.04
APOBP04114 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBP04114 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBP04114 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBP04114 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBP04114 AC027682.1-201ENST00000562846 899 ntBASIC14.82□□□□□ -0.04
APOBP04114 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBP04114 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC14.81□□□□□ -0.04
APOBP04114 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.81□□□□□ -0.04
APOBP04114 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
APOBP04114 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBP04114 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.8□□□□□ -0.04
APOBP04114 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.8□□□□□ -0.04
APOBP04114 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.8□□□□□ -0.04
APOBP04114 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOBP04114 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOBP04114 ESRRAP2-201ENST00000418437 1549 ntBASIC14.8□□□□□ -0.04
APOBP04114 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.8□□□□□ -0.04
APOBP04114 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOBP04114 ID1-201ENST00000376105 1233 ntBASIC14.8□□□□□ -0.04
APOBP04114 YBX1P1-201ENST00000445822 960 ntBASIC14.8□□□□□ -0.04
APOBP04114 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.8□□□□□ -0.04
APOBP04114 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBP04114 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBP04114 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBP04114 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOBP04114 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBP04114 AC004448.1-201ENST00000458332 883 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L2-201ENST00000561772 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOBP04114 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBP04114 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
APOBP04114 DUX4L6-201ENST00000626483 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L1-201ENST00000627662 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L8-201ENST00000629013 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L3-201ENST00000630187 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L7-201ENST00000630678 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 DUX4L5-201ENST00000630834 1275 ntBASIC14.79□□□□□ -0.04
APOBP04114 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOBP04114 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBP04114 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBP04114 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBP04114 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBP04114 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOBP04114 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBP04114 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOBP04114 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBP04114 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBP04114 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOBP04114 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBP04114 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
APOBP04114 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBP04114 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBP04114 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms