Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCRP04035 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCRP04035 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.63■■□□□ 1.85
HMGCRP04035 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.63■■□□□ 1.85
HMGCRP04035 AL136967.2-201ENST00000623968 743 ntBASIC26.63■■□□□ 1.85
HMGCRP04035 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCRP04035 FOXO3B-201ENST00000395675 1928 ntBASIC26.63■■□□□ 1.85
HMGCRP04035 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCRP04035 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
HMGCRP04035 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCRP04035 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCRP04035 AF213884.3-201ENST00000563833 479 ntBASIC26.62■■□□□ 1.85
HMGCRP04035 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.62■■□□□ 1.85
HMGCRP04035 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
HMGCRP04035 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
HMGCRP04035 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.61■■□□□ 1.85
HMGCRP04035 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.61■■□□□ 1.85
HMGCRP04035 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
HMGCRP04035 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCRP04035 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
HMGCRP04035 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCRP04035 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.6■■□□□ 1.85
HMGCRP04035 MIR6821-201ENST00000617625 74 ntBASIC26.6■■□□□ 1.85
HMGCRP04035 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.6■■□□□ 1.85
HMGCRP04035 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCRP04035 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCRP04035 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.59■■□□□ 1.85
HMGCRP04035 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
HMGCRP04035 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HMGCRP04035 MIR939-201ENST00000401314 82 ntBASIC26.59■■□□□ 1.85
HMGCRP04035 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.59■■□□□ 1.85
HMGCRP04035 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.59■■□□□ 1.85
HMGCRP04035 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HMGCRP04035 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.59■■□□□ 1.85
HMGCRP04035 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.58■■□□□ 1.85
HMGCRP04035 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.58■■□□□ 1.85
HMGCRP04035 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.58■■□□□ 1.85
HMGCRP04035 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.58■■□□□ 1.85
HMGCRP04035 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HMGCRP04035 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HMGCRP04035 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
HMGCRP04035 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HMGCRP04035 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
HMGCRP04035 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.56■■□□□ 1.84
HMGCRP04035 AP001330.3-201ENST00000520123 633 ntBASIC26.56■■□□□ 1.84
HMGCRP04035 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.56■■□□□ 1.84
HMGCRP04035 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
HMGCRP04035 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCRP04035 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.55■■□□□ 1.84
HMGCRP04035 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
HMGCRP04035 AC090877.2-201ENST00000558441 1738 ntBASIC26.55■■□□□ 1.84
HMGCRP04035 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCRP04035 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCRP04035 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCRP04035 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCRP04035 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HMGCRP04035 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.54■■□□□ 1.84
HMGCRP04035 AC097381.1-201ENST00000429019 1296 ntBASIC26.54■■□□□ 1.84
HMGCRP04035 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HMGCRP04035 DUX4L19-201ENST00000557448 1267 ntBASIC26.54■■□□□ 1.84
HMGCRP04035 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.54■■□□□ 1.84
HMGCRP04035 AC091305.1-201ENST00000479476 895 ntBASIC26.53■■□□□ 1.84
HMGCRP04035 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
HMGCRP04035 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
HMGCRP04035 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HMGCRP04035 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
HMGCRP04035 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.52■■□□□ 1.84
HMGCRP04035 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
HMGCRP04035 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
HMGCRP04035 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.51■■□□□ 1.83
HMGCRP04035 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HMGCRP04035 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HMGCRP04035 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.51■■□□□ 1.83
HMGCRP04035 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.51■■□□□ 1.83
HMGCRP04035 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HMGCRP04035 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.51■■□□□ 1.83
HMGCRP04035 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
HMGCRP04035 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.5■■□□□ 1.83
HMGCRP04035 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HMGCRP04035 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
HMGCRP04035 AC004448.1-201ENST00000458332 883 ntBASIC26.5■■□□□ 1.83
HMGCRP04035 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.5■■□□□ 1.83
HMGCRP04035 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.5■■□□□ 1.83
HMGCRP04035 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.5■■□□□ 1.83
HMGCRP04035 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.5■■□□□ 1.83
HMGCRP04035 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.5■■□□□ 1.83
HMGCRP04035 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HMGCRP04035 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
HMGCRP04035 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCRP04035 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCRP04035 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCRP04035 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCRP04035 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.48■■□□□ 1.83
HMGCRP04035 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCRP04035 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms