Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LTAP01374 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.57■□□□□ 0.4
LTAP01374 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LTAP01374 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.57■□□□□ 0.4
LTAP01374 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.57■□□□□ 0.4
LTAP01374 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LTAP01374 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LTAP01374 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LTAP01374 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LTAP01374 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.55■□□□□ 0.4
LTAP01374 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LTAP01374 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.55■□□□□ 0.4
LTAP01374 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LTAP01374 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.55■□□□□ 0.4
LTAP01374 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LTAP01374 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
LTAP01374 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LTAP01374 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LTAP01374 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.54■□□□□ 0.4
LTAP01374 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LTAP01374 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LTAP01374 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LTAP01374 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.54■□□□□ 0.4
LTAP01374 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LTAP01374 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LTAP01374 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
LTAP01374 DUX4L11-201ENST00000611504 1267 ntBASIC17.54■□□□□ 0.4
LTAP01374 DUX4L12-201ENST00000614593 1267 ntBASIC17.54■□□□□ 0.4
LTAP01374 DUX4L14-201ENST00000621227 1267 ntBASIC17.54■□□□□ 0.4
LTAP01374 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.54■□□□□ 0.4
LTAP01374 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LTAP01374 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.54■□□□□ 0.4
LTAP01374 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.53■□□□□ 0.4
LTAP01374 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LTAP01374 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.53■□□□□ 0.4
LTAP01374 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.53■□□□□ 0.4
LTAP01374 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LTAP01374 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.53■□□□□ 0.4
LTAP01374 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LTAP01374 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LTAP01374 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.52■□□□□ 0.4
LTAP01374 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LTAP01374 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LTAP01374 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LTAP01374 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LTAP01374 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LTAP01374 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LTAP01374 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LTAP01374 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
LTAP01374 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.51■□□□□ 0.39
LTAP01374 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LTAP01374 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LTAP01374 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LTAP01374 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LTAP01374 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LTAP01374 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.5■□□□□ 0.39
LTAP01374 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LTAP01374 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LTAP01374 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LTAP01374 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms