Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.26■□□□□ 0.67
TGFAP01135 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TGFAP01135 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TGFAP01135 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TGFAP01135 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TGFAP01135 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TGFAP01135 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TGFAP01135 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.25■□□□□ 0.67
TGFAP01135 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.25■□□□□ 0.67
TGFAP01135 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TGFAP01135 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TGFAP01135 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TGFAP01135 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
TGFAP01135 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.24■□□□□ 0.67
TGFAP01135 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 AC106739.1-201ENST00000617035 715 ntBASIC19.24■□□□□ 0.67
TGFAP01135 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TGFAP01135 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TGFAP01135 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
TGFAP01135 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TGFAP01135 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.24■□□□□ 0.67
TGFAP01135 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TGFAP01135 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TGFAP01135 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.23■□□□□ 0.67
TGFAP01135 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.23■□□□□ 0.67
TGFAP01135 AC142381.2-201ENST00000566120 298 ntBASIC19.23■□□□□ 0.67
TGFAP01135 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TGFAP01135 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TGFAP01135 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TGFAP01135 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TGFAP01135 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.23■□□□□ 0.67
TGFAP01135 AC097639.1-201ENST00000565519 1891 ntBASIC19.22■□□□□ 0.67
TGFAP01135 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TGFAP01135 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TGFAP01135 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.22■□□□□ 0.67
TGFAP01135 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.22■□□□□ 0.67
TGFAP01135 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TGFAP01135 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TGFAP01135 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TGFAP01135 UNC93B3-201ENST00000308076 687 ntBASIC19.21■□□□□ 0.67
TGFAP01135 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.21■□□□□ 0.67
TGFAP01135 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.21■□□□□ 0.67
TGFAP01135 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.21■□□□□ 0.67
TGFAP01135 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.21■□□□□ 0.67
TGFAP01135 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TGFAP01135 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TGFAP01135 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TGFAP01135 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TGFAP01135 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TGFAP01135 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.19■□□□□ 0.66
TGFAP01135 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TGFAP01135 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.19■□□□□ 0.66
TGFAP01135 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.19■□□□□ 0.66
TGFAP01135 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TGFAP01135 SRD5A1P1-201ENST00000442297 786 ntBASIC19.19■□□□□ 0.66
TGFAP01135 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TGFAP01135 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TGFAP01135 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TGFAP01135 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
TGFAP01135 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.19■□□□□ 0.66
TGFAP01135 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TGFAP01135 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TGFAP01135 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TGFAP01135 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TGFAP01135 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.18■□□□□ 0.66
TGFAP01135 AL136162.1-201ENST00000607711 1078 ntBASIC19.18■□□□□ 0.66
TGFAP01135 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TGFAP01135 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.18■□□□□ 0.66
TGFAP01135 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TGFAP01135 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TGFAP01135 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TGFAP01135 ERN1-208ENST00000606895 2068 ntBASIC19.17■□□□□ 0.66
TGFAP01135 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TGFAP01135 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.17■□□□□ 0.66
TGFAP01135 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.17■□□□□ 0.66
TGFAP01135 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.17■□□□□ 0.66
TGFAP01135 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TGFAP01135 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.16■□□□□ 0.66
TGFAP01135 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TGFAP01135 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TGFAP01135 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TGFAP01135 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TGFAP01135 AC096887.2-201ENST00000623443 1957 ntBASIC19.15■□□□□ 0.66
TGFAP01135 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
TGFAP01135 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
TGFAP01135 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TGFAP01135 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TGFAP01135 ZNRF2P3-201ENST00000424200 374 ntBASIC19.15■□□□□ 0.66
TGFAP01135 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.15■□□□□ 0.66
TGFAP01135 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TGFAP01135 AC135279.3-201ENST00000610945 1311 ntBASIC19.15■□□□□ 0.66
TGFAP01135 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TGFAP01135 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TGFAP01135 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms