Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.52■□□□□ 0.88
ABCD4O14678 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCD4O14678 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCD4O14678 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCD4O14678 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 AC012676.1-201ENST00000574705 1949 ntBASIC20.51■□□□□ 0.87
ABCD4O14678 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ABCD4O14678 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCD4O14678 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCD4O14678 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ABCD4O14678 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCD4O14678 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ABCD4O14678 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
ABCD4O14678 BX664725.1-201ENST00000438252 379 ntBASIC20.5■□□□□ 0.87
ABCD4O14678 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ABCD4O14678 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ABCD4O14678 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCD4O14678 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCD4O14678 ERN1-208ENST00000606895 2068 ntBASIC20.5■□□□□ 0.87
ABCD4O14678 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCD4O14678 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCD4O14678 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCD4O14678 KRT125P-201ENST00000546827 989 ntBASIC20.49■□□□□ 0.87
ABCD4O14678 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCD4O14678 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCD4O14678 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCD4O14678 CLDN5-201ENST00000403084 2357 ntBASIC20.49■□□□□ 0.87
ABCD4O14678 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCD4O14678 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
ABCD4O14678 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ABCD4O14678 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.48■□□□□ 0.87
ABCD4O14678 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCD4O14678 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCD4O14678 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCD4O14678 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.47■□□□□ 0.87
ABCD4O14678 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ABCD4O14678 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCD4O14678 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.47■□□□□ 0.87
ABCD4O14678 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCD4O14678 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCD4O14678 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ABCD4O14678 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCD4O14678 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCD4O14678 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.46■□□□□ 0.87
ABCD4O14678 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ABCD4O14678 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
ABCD4O14678 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.45■□□□□ 0.86
ABCD4O14678 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCD4O14678 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ABCD4O14678 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCD4O14678 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ABCD4O14678 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.45■□□□□ 0.86
ABCD4O14678 AC096887.2-201ENST00000623443 1957 ntBASIC20.45■□□□□ 0.86
ABCD4O14678 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.44■□□□□ 0.86
ABCD4O14678 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ABCD4O14678 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
ABCD4O14678 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.44■□□□□ 0.86
ABCD4O14678 MIR4787-201ENST00000607364 84 ntBASIC20.44■□□□□ 0.86
ABCD4O14678 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ABCD4O14678 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.43■□□□□ 0.86
ABCD4O14678 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ABCD4O14678 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 AC131212.1-201ENST00000613771 668 ntBASIC20.43■□□□□ 0.86
ABCD4O14678 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ABCD4O14678 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ABCD4O14678 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCD4O14678 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.42■□□□□ 0.86
ABCD4O14678 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCD4O14678 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCD4O14678 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms