Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
AP3D1O14617 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP3D1O14617 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
AP3D1O14617 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP3D1O14617 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
AP3D1O14617 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP3D1O14617 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP3D1O14617 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
AP3D1O14617 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP3D1O14617 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
AP3D1O14617 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP3D1O14617 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
AP3D1O14617 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP3D1O14617 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
AP3D1O14617 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
AP3D1O14617 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP3D1O14617 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.67■■□□□ 1.06
AP3D1O14617 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
AP3D1O14617 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
AP3D1O14617 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
AP3D1O14617 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AP3D1O14617 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.65■■□□□ 1.06
AP3D1O14617 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 KRT18P10-201ENST00000388836 1287 ntBASIC21.65■■□□□ 1.06
AP3D1O14617 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
AP3D1O14617 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.65■■□□□ 1.06
AP3D1O14617 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP3D1O14617 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
AP3D1O14617 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP3D1O14617 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3D1O14617 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3D1O14617 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3D1O14617 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3D1O14617 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.63■■□□□ 1.05
AP3D1O14617 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3D1O14617 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3D1O14617 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.62■■□□□ 1.05
AP3D1O14617 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.62■■□□□ 1.05
AP3D1O14617 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3D1O14617 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
AP3D1O14617 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3D1O14617 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.62■■□□□ 1.05
AP3D1O14617 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3D1O14617 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
AP3D1O14617 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AP3D1O14617 LINC00543-201ENST00000567234 1845 ntBASIC21.62■■□□□ 1.05
AP3D1O14617 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.61■■□□□ 1.05
AP3D1O14617 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 DUX4L9-201ENST00000449051 1259 ntBASIC21.61■■□□□ 1.05
AP3D1O14617 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.61■■□□□ 1.05
AP3D1O14617 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
AP3D1O14617 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.61■■□□□ 1.05
AP3D1O14617 MIR6089-201ENST00000616698 64 ntBASIC21.61■■□□□ 1.05
AP3D1O14617 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
AP3D1O14617 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
AP3D1O14617 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
AP3D1O14617 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3D1O14617 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3D1O14617 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AP3D1O14617 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.6■■□□□ 1.05
AP3D1O14617 KRT18P60-201ENST00000312876 1297 ntBASIC21.6■■□□□ 1.05
AP3D1O14617 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AP3D1O14617 ABHD17AP5-201ENST00000580133 923 ntBASIC21.6■■□□□ 1.05
AP3D1O14617 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3D1O14617 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.6■■□□□ 1.05
AP3D1O14617 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.59■■□□□ 1.05
AP3D1O14617 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
AP3D1O14617 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
AP3D1O14617 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
AP3D1O14617 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.59■■□□□ 1.05
AP3D1O14617 AC018755.3-202ENST00000596210 929 ntBASIC21.59■■□□□ 1.05
AP3D1O14617 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AP3D1O14617 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
AP3D1O14617 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
AP3D1O14617 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
AP3D1O14617 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms