Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H3BM21 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.25■■□□□ 1.31
H3BM21 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.25■■□□□ 1.31
H3BM21 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.25■■□□□ 1.31
H3BM21 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.25■■□□□ 1.31
H3BM21 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.25■■□□□ 1.31
H3BM21 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.25■■□□□ 1.31
H3BM21 AC092028.1-203ENST00000608262 953 ntBASIC23.25■■□□□ 1.31
H3BM21 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
H3BM21 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.25■■□□□ 1.31
H3BM21 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.24■■□□□ 1.31
H3BM21 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.24■■□□□ 1.31
H3BM21 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.24■■□□□ 1.31
H3BM21 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
H3BM21 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.23■■□□□ 1.31
H3BM21 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.23■■□□□ 1.31
H3BM21 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
H3BM21 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.22■■□□□ 1.31
H3BM21 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
H3BM21 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.21■■□□□ 1.31
H3BM21 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
H3BM21 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
H3BM21 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
H3BM21 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.2■■□□□ 1.3
H3BM21 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.2■■□□□ 1.3
H3BM21 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.2■■□□□ 1.3
H3BM21 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
H3BM21 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.19■■□□□ 1.3
H3BM21 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.19■■□□□ 1.3
H3BM21 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
H3BM21 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
H3BM21 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 MTDHP2-201ENST00000601468 714 ntBASIC23.18■■□□□ 1.3
H3BM21 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.18■■□□□ 1.3
H3BM21 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
H3BM21 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
H3BM21 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
H3BM21 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
H3BM21 AC019069.1-201ENST00000610008 1333 ntBASIC23.17■■□□□ 1.3
H3BM21 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.17■■□□□ 1.3
H3BM21 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 FOXO3B-201ENST00000395675 1928 ntBASIC23.17■■□□□ 1.3
H3BM21 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.17■■□□□ 1.3
H3BM21 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.16■■□□□ 1.3
H3BM21 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.15■■□□□ 1.3
H3BM21 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.15■■□□□ 1.3
H3BM21 AC010997.5-201ENST00000609182 354 ntBASIC23.15■■□□□ 1.3
H3BM21 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.15■■□□□ 1.3
H3BM21 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.14■■□□□ 1.29
H3BM21 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.14■■□□□ 1.29
H3BM21 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.13■■□□□ 1.29
H3BM21 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 SLC6A10P-202ENST00000431994 2058 ntBASIC23.13■■□□□ 1.29
H3BM21 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms