Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
H3BM21 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.25■■□□□ 1.31
H3BM21 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.25■■□□□ 1.31
H3BM21 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.25■■□□□ 1.31
H3BM21 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.25■■□□□ 1.31
H3BM21 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.25■■□□□ 1.31
H3BM21 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.25■■□□□ 1.31
H3BM21 AC092028.1-203ENST00000608262 953 ntBASIC23.25■■□□□ 1.31
H3BM21 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
H3BM21 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.25■■□□□ 1.31
H3BM21 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.24■■□□□ 1.31
H3BM21 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.24■■□□□ 1.31
H3BM21 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.24■■□□□ 1.31
H3BM21 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
H3BM21 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
H3BM21 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.23■■□□□ 1.31
H3BM21 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.23■■□□□ 1.31
H3BM21 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H3BM21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
H3BM21 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H3BM21 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.22■■□□□ 1.31
H3BM21 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
H3BM21 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.21■■□□□ 1.31
H3BM21 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
H3BM21 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
H3BM21 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.21■■□□□ 1.31
H3BM21 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
H3BM21 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
H3BM21 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.2■■□□□ 1.3
H3BM21 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.2■■□□□ 1.3
H3BM21 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.2■■□□□ 1.3
H3BM21 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
H3BM21 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
H3BM21 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.19■■□□□ 1.3
H3BM21 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.19■■□□□ 1.3
H3BM21 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
H3BM21 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
H3BM21 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
H3BM21 MTDHP2-201ENST00000601468 714 ntBASIC23.18■■□□□ 1.3
H3BM21 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.18■■□□□ 1.3
H3BM21 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
H3BM21 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
H3BM21 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
H3BM21 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
H3BM21 AC019069.1-201ENST00000610008 1333 ntBASIC23.17■■□□□ 1.3
H3BM21 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.17■■□□□ 1.3
H3BM21 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 FOXO3B-201ENST00000395675 1928 ntBASIC23.17■■□□□ 1.3
H3BM21 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H3BM21 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.17■■□□□ 1.3
H3BM21 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.16■■□□□ 1.3
H3BM21 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H3BM21 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.15■■□□□ 1.3
H3BM21 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.15■■□□□ 1.3
H3BM21 AC010997.5-201ENST00000609182 354 ntBASIC23.15■■□□□ 1.3
H3BM21 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.15■■□□□ 1.3
H3BM21 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
H3BM21 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.14■■□□□ 1.29
H3BM21 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.14■■□□□ 1.29
H3BM21 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
H3BM21 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.13■■□□□ 1.29
H3BM21 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 SLC6A10P-202ENST00000431994 2058 ntBASIC23.13■■□□□ 1.29
H3BM21 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H3BM21 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms