Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 LINC00543-201ENST00000567234 1845 ntBASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.67■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.66■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 AL592295.1-201ENST00000400984 884 ntBASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.64■□□□□ 0.9
IGKV1D-43A0A0B4J1Z2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC004812.2-201ENST00000611079 2094 ntBASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 TSPY13P-201ENST00000338964 914 ntBASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC139795.1-202ENST00000500444 432 ntBASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC090877.2-201ENST00000558441 1738 ntBASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 PVT1_1.1-201ENST00000615125 194 ntBASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.61■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms