Protein–RNA interactions for Protein: A0A0A0MS05

TRBV5-7, T-cell receptor beta variable 5-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-7A0A0A0MS05 ABHD17AP4-201ENST00000411545 909 ntBASIC20.27■□□□□ 0.84
TRBV5-7A0A0A0MS05 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.27■□□□□ 0.83
TRBV5-7A0A0A0MS05 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TRBV5-7A0A0A0MS05 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 AC079834.2-201ENST00000609776 1949 ntBASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-7A0A0A0MS05 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
TRBV5-7A0A0A0MS05 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.25■□□□□ 0.83
TRBV5-7A0A0A0MS05 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-7A0A0A0MS05 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-7A0A0A0MS05 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV5-7A0A0A0MS05 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 RP9P-202ENST00000450133 1212 ntBASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-7A0A0A0MS05 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-7A0A0A0MS05 FOXO3B-201ENST00000395675 1928 ntBASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 ECEL1P2-201ENST00000461596 1295 ntBASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TRBV5-7A0A0A0MS05 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 AC093536.1-201ENST00000569153 554 ntBASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-7A0A0A0MS05 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV5-7A0A0A0MS05 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV5-7A0A0A0MS05 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 C9orf163-202ENST00000624034 2573 ntBASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV5-7A0A0A0MS05 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-7A0A0A0MS05 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms